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BaseInfo

ncRNA ID novel_gma_miR4938
Species Glycine max
Class miRNA
Genome position Chr12:31544413-31544474 [+]
Reference genome Glycine_max_v2.0
Source SRR2968974
Length 21
Mature sequence(if miRNA) 1 - UCGCUUGCAGACAUAUUAGUG - 21
Stem-loop(if miRNA) --  GC UG    CA          G GACC
  UC  U  CAGA  UAUUAGUGUC U    U
  ||  |  ||||  |||||||||| |
  AG  A  GUCU  AUAGUCAUAG A    U
AU  GA GU    AC          G AAAC
Stem-loop sequence UCGCUUGCAGACAUAUUAGUGUCGUGACCUUCAAAAGGAUACUGAUACAUCUGUGAAGGAUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014772423.1
ncRNA:21   GUGAUUAUACAGACGUUCGCU   1
  ||||=||||||||||||||||
targets:609   CACUGAUAUGUCUGCAAGCGA   629

1.0 PREDICTED: Glycine max uncharacterized LOC106797598 (LOC106797598), mRNA uncharacterized LOC106797598(LOC106797598) coding protein psRNATarget
XM_006593703.2
ncRNA:21   GUGAUUAUACAGACGUUCGCU   1
  ||||=||||||||||||||||
targets:486   CACUGAUAUGUCUGCAAGCGA   506

1.0 PREDICTED: Glycine max uncharacterized LOC102665796 (LOC102665796), mRNA uncharacterized LOC102665796(LOC102665796) coding protein psRNATarget
XM_014777540.1
ncRNA:21   GUGAUUAUACAGACGUUCGCU   1
  ||||=||||||||||||||||
targets:764   CACUGAUAUGUCUGCAAGCGA   784

1.0 PREDICTED: Glycine max uncharacterized LOC106799325 (LOC106799325), mRNA uncharacterized LOC106799325(LOC106799325) coding protein psRNATarget
XM_014768811.1
ncRNA:21   GUGAUUAUACAGACGUUCGCU   1
  ||||=||||||||||||||||
targets:754   CACUGAUAUGUCUGCAAGCGA   774

1.0 PREDICTED: Glycine max uncharacterized LOC106796494 (LOC106796494), mRNA uncharacterized LOC106796494(LOC106796494) coding protein psRNATarget
XM_014766327.1
ncRNA:21   GUGAUUAUACAGACGUUCGCU   1
  ||||=||||||||||||||||
targets:952   CACUGAUAUGUCUGCAAGCGA   972

1.0 PREDICTED: Glycine max uncharacterized LOC102662161 (LOC102662161), mRNA uncharacterized LOC102662161(LOC102662161) coding protein psRNATarget
XM_014774130.1
ncRNA:21   GUGAUUAUACAGACGUUCGCU   1
  ||||=||||||||||||||||
targets:1319   CACUGAUAUGUCUGCAAGCGA   1339

1.0 PREDICTED: Glycine max serine/threonine-protein phosphatase 7 long form homolog (LOC102660045), mRNA serine/threonine-protein phosphatase 7 long form homolog(LOC102660045) coding protein psRNATarget
XM_014777438.1
ncRNA:21   GUGAUUAUACAGACGUUCGCU   1
  ||||=||||||||||||||||
targets:1378   CACUGAUAUGUCUGCAAGCGA   1398

1.0 PREDICTED: Glycine max serine/threonine-protein phosphatase 7 long form homolog (LOC106799245), mRNA serine/threonine-protein phosphatase 7 long form homolog(LOC106799245) coding protein psRNATarget
XM_014778483.1
ncRNA:21   GUGAUUAUACAGACGUUCGCU   1
  ||||=||||||||||||||||
targets:1689   CACUGAUAUGUCUGCAAGCGA   1709

1.0 PREDICTED: Glycine max serine/threonine-protein phosphatase 7 long form homolog (LOC106799588), mRNA serine/threonine-protein phosphatase 7 long form homolog(LOC106799588) coding protein psRNATarget
XM_014769495.1
ncRNA:21   GUGAUUAUACAGACGUUCGCU   1
  ||||=||||||||||||||||
targets:1798   CACUGAUAUGUCUGCAAGCGA   1818

1.0 PREDICTED: Glycine max serine/threonine-protein phosphatase 7 long form homolog (LOC106796621), mRNA serine/threonine-protein phosphatase 7 long form homolog(LOC106796621) coding protein psRNATarget
XM_014764570.1
ncRNA:21   GUGAUUAUACAGACGUUCGCU   1
  ||||=||||||||||||||||
targets:1798   CACUGAUAUGUCUGCAAGCGA   1818

1.0 PREDICTED: Glycine max serine/threonine-protein phosphatase 7 long form homolog (LOC106795246), mRNA serine/threonine-protein phosphatase 7 long form homolog(LOC106795246) coding protein psRNATarget
XM_014761622.1
ncRNA:21   GUGAUUAUACAGACGUUCGCU   1
  =|||||||||||||||||=||
targets:441   UACUAAUAUGUCUGCAAGUGA   461

1.5 PREDICTED: Glycine max uncharacterized LOC106794364 (LOC106794364), mRNA uncharacterized LOC106794364(LOC106794364) coding protein psRNATarget
XM_006581609.2
ncRNA:21   GUGAUUAUACAGACGUUCGCU   1
  =||||||*||||||||||||*
targets:90   UACUAAUUUGUCUGCAAGCGU   110

2.0 PREDICTED: Glycine max growth-regulating factor 7-like (LOC100796948), transcript variant X2, mRNA growth-regulating factor 7-like(LOC100796948) coding protein psRNATarget
XM_003526701.3
ncRNA:21   GUGAUUAUACAGACGUUCGCU   1
  =||||||*||||||||||||*
targets:89   UACUAAUUUGUCUGCAAGCGU   109

2.0 PREDICTED: Glycine max growth-regulating factor 7-like (LOC100796948), transcript variant X1, mRNA growth-regulating factor 7-like(LOC100796948) coding protein psRNATarget
XM_014766208.1
ncRNA:21   GUGAUUAUACAGACGUUCGCU   1
  ||||=||||||||||||||*|
targets:895   CACUGAUAUGUCUGCAAGCAA   915

2.5 PREDICTED: Glycine max uncharacterized LOC106795616 (LOC106795616), mRNA uncharacterized LOC106795616(LOC106795616) coding protein psRNATarget