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BaseInfo

ncRNA ID novel_gma_miR4935
Species Glycine max
Class miRNA
Genome position Chr1:8193414-8193484 [-]
Reference genome Glycine_max_v2.0
Source SRR2968974;SRR835771
Length 24
Mature sequence(if miRNA) 1 - ACACUUGAGGGGGAGAUUGUUGGA - 24
Stem-loop(if miRNA) UGA   UG -     G      ---        A  A
   UAA  A CUUCC CUCGAG   GGGUUUCU CC U
   |||  | ||||| ||||||   |||||||| ||
   GUU  U GAGGG GAGUUC   CUCAGAGA GG G
-AG   GU A     G      ACA        A  U
Stem-loop sequence UGAUAAUGACUUCCGCUCGAGGGGUUUCUACCAUGUGGAAGAGACUCACACUUGAGGGGGAGAUUGUUGGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014776460.1
ncRNA:24   AGGUUGU-UAGAGGGGGAGUUCACA   1
  *||||||-|||||||||||||||||
targets:1603   CCCAACACAUCUCCCCCUCAAGUGU   1627

2.0 PREDICTED: Glycine max zinc finger CCCH domain-containing protein 38-like (LOC100803151), transcript variant X1, mRNA zinc finger CCCH domain-containing protein 38-like(LOC100803151) coding protein psRNATarget
XM_014776461.1
ncRNA:24   AGGUUGU-UAGAGGGGGAGUUCACA   1
  *||||||-|||||||||||||||||
targets:1603   CCCAACACAUCUCCCCCUCAAGUGU   1627

2.0 PREDICTED: Glycine max zinc finger CCCH domain-containing protein 38-like (LOC100803151), transcript variant X2, mRNA zinc finger CCCH domain-containing protein 38-like(LOC100803151) coding protein psRNATarget