Search result

BaseInfo

ncRNA ID novel_gma_miR4929
Species Glycine max
Class miRNA
Genome position Chr1:10632701-10632815 [+]
Reference genome Glycine_max_v2.0
Source SRR2968974
Length 24
Mature sequence(if miRNA) 1 - GUAAGAAACAUACGGAUUGACAAU - 24
Stem-loop(if miRNA) --                    CAAUC          C   AA              
  GUAAGAAACAUACGGAUUGA     UGUAAGUUAC UAC  AUUGUCAAUUUGUAA
  ||||||||||||||||||||     |||||||||| |||  ||||||||||||||C
  UAUUCUUUGUAUGCCUAACU     ACAUUCAAUG AUG  UAACAGUUAAAUAUU
GG                    UUAAA          U   CC              
Stem-loop sequence GUAAGAAACAUACGGAUUGACAAUCUGUAAGUUACCUACAAAUUGUCAAUUUGUAACUUAUAAAUUGACAAUCCGUAUGUAACUUACAAAAUUUCAAUCCGUAUGUUUCUUAUGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_001250929.2
ncRNA:24   UAAC---AGUUAGGCAUACAAAGAAUG   1
  |||*---||||||=||||||||||||*
targets:607   AUUUACAUCAAUCUGUAUGUUUCUUAG   633

2.0 Glycine max uncharacterized LOC100305608 (LOC100305608), mRNA uncharacterized LOC100305608(LOC100305608) coding protein psRNATarget
BT089297.1
ncRNA:24   UAAC---AGUUAGGCAUACAAAGAAUG   1
  |||*---||||||=||||||||||||*
targets:609   AUUUACAUCAAUCUGUAUGUUUCUUAG   635

2.0 Soybean clone JCVI-FLGm-1J9 unknown mRNA NA coding protein psRNATarget