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BaseInfo

ncRNA ID novel_gma_miR4922
Species Glycine max
Class miRNA
Genome position Chr17:41600978-41601094 [+]
Reference genome Glycine_max_v2.0
Source SRR1295516
Length 21
Mature sequence(if miRNA) 97 - CAACUUGAUCCGCUUUUGGUC - 117
Stem-loop(if miRNA) --AUUC                 UC    AAAAC   C       G      CC    A
      GGGCGGAUCAAGUUGAU  GUGA     UCA GGAUCAA UUGAUC  UGUA U
      |||||||||||||||||  ||||     ||| ||||||| ||||||  |||| G
      UUCGCCUAGUUCAACUA  CACU     AGU CCUAGUU AACUAG  ACGU C
CUGGUU                 GA    CAAAA   A       G      --    U
Stem-loop sequence AUUCGGGCGGAUCAAGUUGAUUCGUGAAAAACUCACGGAUCAAGUUGAUCCCUGUAAUGCUUGCAGAUCAAGUUGAUCCAUGAAAAACUCACAGAUCAACUUGAUCCGCUUUUGGUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003519432.3
ncRNA:21   CUGGUUUUCGCCUAGUUCAAC   1
  **|||==|||||||||||||*
targets:769   UUCCAGGAGCGGAUCAAGUUA   789

3.0 PREDICTED: Glycine max geranylgeranyl diphosphate reductase, chloroplastic-like (LOC100787525), mRNA geranylgeranyl diphosphate reductase, chloroplastic-like(LOC100787525) coding protein psRNATarget