ncRNA ID | novel_gma_miR4922 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr17:41600978-41601094 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1295516 |
Length | 21 |
Mature sequence(if miRNA) | 97 - CAACUUGAUCCGCUUUUGGUC - 117 |
Stem-loop(if miRNA) |
--AUUC                 UC    AAAAC   C       G      CC    A       GGGCGGAUCAAGUUGAU  GUGA     UCA GGAUCAA UUGAUC  UGUA U       |||||||||||||||||  ||||     ||| ||||||| ||||||  |||| G       UUCGCCUAGUUCAACUA  CACU     AGU CCUAGUU AACUAG  ACGU C CUGGUU                 GA    CAAAA   A       G      --    U |
Stem-loop sequence | AUUCGGGCGGAUCAAGUUGAUUCGUGAAAAACUCACGGAUCAAGUUGAUCCCUGUAAUGCUUGCAGAUCAAGUUGAUCCAUGAAAAACUCACAGAUCAACUUGAUCCGCUUUUGGUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003519432.3 |
|
3.0 | PREDICTED: Glycine max geranylgeranyl diphosphate reductase, chloroplastic-like (LOC100787525), mRNA | geranylgeranyl diphosphate reductase, chloroplastic-like(LOC100787525) | coding protein | psRNATarget |