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BaseInfo

ncRNA ID novel_gma_miR4920
Species Glycine max
Class miRNA
Genome position Chr1:18241269-18241313 [-]
Reference genome Glycine_max_v2.0
Source SRR2968974;SRR2968978
Length 22
Mature sequence(if miRNA) 24 - UGGUAUCAAGAGCAUCUUCAUU - 45
Stem-loop(if miRNA) U     -  --        U  A
 GGUAU CA  AGAGCAUC UC U
 ||||| ||  |||||||| || U
 CCAUA GU  UCUUGUAG GG U
-     C  AU        U  A
Stem-loop sequence UGGUAUCAAGAGCAUCUUCAUUUAGGUGAUGUUCUUAUGCAUACC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT098985.1
ncRNA:22   UUACUUCUACGAGAACUAUGGU   1
  =|||||||||||||||||||||
targets:146   GAUGAAGAUGCUCUUGAUACCA   167

0.0 Soybean clone JCVI-FLGm-16F8 unknown mRNA NA coding protein psRNATarget
XM_006578663.2
ncRNA:22   UUACUUCUACGAGAACUAUGGU   1
  ||*|||||*|||||||*|||||
targets:326   AAAGAAGACGCUCUUGUUACCA   347

2.5 PREDICTED: Glycine max mediator of RNA polymerase II transcription subunit 36a-like (LOC100797625), transcript variant X2, mRNA mediator of RNA polymerase II transcription subunit 36a-like(LOC100797625) coding protein psRNATarget
XM_003523127.2
ncRNA:22   UUACUUCUACGAGAACUAUGGU   1
  ||*|||||*|||||||*|||||
targets:326   AAAGAAGACGCUCUUGUUACCA   347

2.5 PREDICTED: Glycine max mediator of RNA polymerase II transcription subunit 36a-like (LOC100797625), transcript variant X1, mRNA mediator of RNA polymerase II transcription subunit 36a-like(LOC100797625) coding protein psRNATarget