ncRNA ID | novel_gma_miR4918 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr10:22660652-22660788 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR2968974;SRR3067738;SRR835761;SRR835767 |
Length | 21 |
Mature sequence(if miRNA) | 117 - ACUUUGAGGAGGGAUAGUCAC - 137 |
Stem-loop(if miRNA) |
--         -     U     CU   A      -              U           CUU    A   ACUUUGAGG AGGGA AGUCA  GUG CUUUGC UUAUUUUUCUAUUA GUUGCUGGCAG   AUAU A   ||||||||| ||||| |||||  ||| |||||| |||||||||||||| |||||||||||   ||||   UGAAACUCC UCCCU UCAGU  CAC GAAACG AAUGAAAAGAUAAU CAACGACCGUU   UAUA U AC         C     -     AU   C      G              U           AAU    U |
Stem-loop sequence | ACUUUGAGGAGGGAUAGUCACUGUGACUUUGCUUAUUUUUCUAUUAUGUUGCUGGCAGCUUAUAUAAUUAUAUUAAUUGCCAGCAACUUAAUAGAAAAGUAAGGCAAAGCCACUAUGACUUCCCUCCCUCAAAGUCA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006604357.2 |
|
2.5 | PREDICTED: Glycine max mediator of RNA polymerase II transcription subunit 33B-like (LOC102669144), mRNA | mediator of RNA polymerase II transcription subunit 33B-like(LOC102669144) | coding protein | psRNATarget |