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BaseInfo

ncRNA ID novel_gma_miR4914
Species Glycine max
Class miRNA
Genome position Chr1:23893691-23893871 [-]
Reference genome Glycine_max_v2.0
Source SRR2968974;SRR2968978
Length 24
Mature sequence(if miRNA) 158 - UUGCACUAGAAGAAUCAGCACCAA - 181
Stem-loop(if miRNA) --           GA            UC    C        U                     G     C    GC         C   
  UUGCACUAGAA  AUCAGCACCAAU  GUGC UCUUCCUC UCUACCAGCUCAAUAUCUUUC UUUCA CUUU  UUUUGUAAA UACA
  |||||||||||  ||||||||||||  |||| |||||||| ||||||||||||||||||||| ||||| ||||  ||||||||| |||C
  AACGUGAUCUU  UAGUCGUGGUUA  CACG AGAAGGAG AGAUGGUCGAGUUAUAGAAAG AAAGU GAAA  AAAACAUUU AUGU
CC           GC            GA    A        C                     G     U    AC         A   
Stem-loop sequence UUGCACUAGAAGAAUCAGCACCAAUUCGUGCCUCUUCCUCUUCUACCAGCUCAAUAUCUUUCGUUUCACCUUUGCUUUUGUAAACUACACUGUAAUUUACAAAACAAAAGUUGAAAGGAAAGAUAUUGAGCUGGUAGACGAGGAAGAAGCACAGAUUGGUGCUGAUCGUUCUAGUGCAACC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006586135.2
ncRNA:24   AACCACGACUAAGAAGAUCACGUU   1
  ||||||||||||*|||||||||||
targets:833   UUGGUGCUGAUUGUUCUAGUGCAA   856

1.5 PREDICTED: Glycine max SNF2 domain-containing protein CLASSY 3-like (LOC100806733), transcript variant X2, mRNA SNF2 domain-containing protein CLASSY 3-like(LOC100806733) coding protein psRNATarget
XM_014779469.1
ncRNA:24   AACCACGACUAAGAAGAUCACGUU   1
  ||||||||||||*|||||||||||
targets:833   UUGGUGCUGAUUGUUCUAGUGCAA   856

1.5 PREDICTED: Glycine max SNF2 domain-containing protein CLASSY 3-like (LOC100806733), transcript variant X1, mRNA SNF2 domain-containing protein CLASSY 3-like(LOC100806733) coding protein psRNATarget
XM_006591670.1
ncRNA:24   AACCACGACUAAGAAGAUCACGUU   1
  ||||||||*|||*|||||||||||
targets:89   UUGGUGCUAAUUGUUCUAGUGCAA   112

2.5 PREDICTED: Glycine max glutathione gamma-glutamylcysteinyltransferase 3-like (LOC100778828), mRNA glutathione gamma-glutamylcysteinyltransferase 3-like(LOC100778828) coding protein psRNATarget