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BaseInfo

ncRNA ID novel_gma_miR4909
Species Glycine max
Class miRNA
Genome position Chr12:8432452-8432534 [+]
Reference genome Glycine_max_v2.0
Source SRR2968974;SRR835765;SRR835771
Length 21
Mature sequence(if miRNA) 1 - AGGUAUUGGCGUGCCUCAAUU - 21
Stem-loop(if miRNA) --             C       U   -G        AAGAU
  AGGUAUUGGCGUG CUCAAUU GAA  ACAUGGUU     G
  ||||||||||||| ||||||| |||  ||||||||
  UCUAUAACUGCGC GAGUUAA UUU  UGUACCGA     A
AC             C       U   AA        CCAAA
Stem-loop sequence AGGUAUUGGCGUGCCUCAAUUUGAAGACAUGGUUAAGAUGAAAACCAGCCAUGUAAUUUUAAUUGAGCCGCGUCAAUAUCUCA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JB170975.1
ncRNA:21   UUAACUCCGUGCGGUUAUGGA   1
  |||||||||||||||||||||
targets:73   AAUUGAGGCACGCCAAUACCU   93

0.0 Sequence 8639 from Patent EP2559767 NA coding protein psRNATarget
LQ242644.1
ncRNA:21   UUAACUCCGUGCGGUUAUGGA   1
  |||||||||||||||||||||
targets:73   AAUUGAGGCACGCCAAUACCU   93

0.0 Sequence 8639 from Patent EP2985353 NA coding protein psRNATarget
HI410514.1
ncRNA:21   UUAACUCCGUGCGGUUAUGGA   1
  |||||||||||||||||||||
targets:73   AAUUGAGGCACGCCAAUACCU   93

0.0 Sequence 8639 from Patent EP2074227 NA coding protein psRNATarget