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BaseInfo

ncRNA ID novel_gma_miR4907
Species Glycine max
Class miRNA
Genome position Chr12:7766796-7766870 [+]
Reference genome Glycine_max_v2.0
Source SRR2968974
Length 24
Mature sequence(if miRNA) 52 - UUAAGACUUACGGAUCAAUUUGAU - 75
Stem-loop(if miRNA) --                    ----------         A
  CAAGUUGAUCCGUAAGUCUU          UUACGGAUC A
  ||||||||||||||||||||          ||||||||| G
  GUUUAACUAGGCAUUCAGAA          AAUGCCUAG U
UA                    UUUUUAGUUG         U
Stem-loop sequence CAAGUUGAUCCGUAAGUCUUUUACGGAUCAAGUUGAUCCGUAAGUUGAUUUUUAAGACUUACGGAUCAAUUUGAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003547498.3
ncRNA:24   UAGUUUAACUAGGCAUUCAGAAUU   1
  |||||*||||||||||||||||||
targets:462   AUCAACUUGAUCCGUAAGUCUUAA   485

1.0 PREDICTED: Glycine max CBL-interacting serine/threonine-protein kinase 1-like (LOC100780524), transcript variant X1, mRNA CBL-interacting serine/threonine-protein kinase 1-like(LOC100780524) coding protein psRNATarget
XM_014768353.1
ncRNA:24   UAGUUUAACUAGGCAUUCAGAAUU   1
  |||||*||||||||||||||||||
targets:1057   AUCAACUUGAUCCGUAAGUCUUAA   1080

1.0 PREDICTED: Glycine max CBL-interacting serine/threonine-protein kinase 1-like (LOC100780524), transcript variant X2, mRNA CBL-interacting serine/threonine-protein kinase 1-like(LOC100780524) coding protein psRNATarget