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BaseInfo

ncRNA ID	novel_gma_miR4881
Species	Glycine max
Class	miRNA
Genome position	Chr9:43417965-43418124 [+]
Reference genome	Glycine_max_v2.0
Source	SRR2968974
Length	24
Mature sequence(if miRNA)	1 - GGUGAGAUCGGCUACAUGAAUUAC - 24
Stem-loop(if miRNA)	-  --U   A          GA    C UG      --UUA   UCAGUUAAAGACCAAAGUUUUGUGAUGUUAUUUGCCAU  GG   GAG UCGGCUACAU  AUUA A  AUAUCA     AGC                                      G  ||   ||| ||||||||||  |||| |  ||||||     |||  CC   CUC AGUCGAUGUG  UAGU U  UAUAGU     UUG                                      A A  UAC   -          UC    U GU      UUUCA   GUUUAAAAGACUGUAGUAAGAUCUAUAGGGAGUCCUAG
Stem-loop sequence	GGUGAGAUCGGCUACAUGAAUUACAUGAUAUCAUUAAGCUCAGUUAAAGACCAAAGUUUUGUGAUGUUAUUUGCCAUGAGAUCCUGAGGGAUAUCUAGAAUGAUGUCAGAAAAUUUGGUUACUUUUGAUAUUGUUUGAUCUGUGUAGCUGACUCCAUCCA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_006579720.2	ncRNA:24   CAUUAAGUACAUCGGCUAGAGUGG   1   ||=||*|||||||||||||||||| targets:457   GUGAUCCAUGUAGCCGAUCUCACC   480 Target Full Sequence	1.0	PREDICTED: Glycine max uncharacterized LOC100791308 (LOC100791308), transcript variant X2, mRNA	uncharacterized LOC100791308(LOC100791308)	coding protein	psRNATarget
XM_003524511.3	ncRNA:24   CAUUAAGUACAUCGGCUAGAGUGG   1   ||=||*|||||||||||||||||| targets:451   GUGAUCCAUGUAGCCGAUCUCACC   474 Target Full Sequence	1.0	PREDICTED: Glycine max uncharacterized LOC100791308 (LOC100791308), transcript variant X1, mRNA	uncharacterized LOC100791308(LOC100791308)	coding protein	psRNATarget
XM_014778071.1	ncRNA:24   CAUUAAGUACAUCGGCUAGAGUGG   1   *|=||||||*||||||||=||||| targets:1379   AUGAUUCAUAUAGCCGAUUUCACC   1402 Target Full Sequence	2.5	PREDICTED: Glycine max 2-keto-3-deoxy-L-rhamnonate aldolase-like (LOC106799469), mRNA	2-keto-3-deoxy-L-rhamnonate aldolase-like(LOC106799469)	coding protein	psRNATarget
BT097754.1	ncRNA:24   CAUUAAGUACAUCGGCUAGAGUGG   1   ||=||*|||||||||||*|||||| targets:684   GUGAUCCAUGUAGCCGACCUCACC   707 Target Full Sequence	2.5	Soybean clone JCVI-FLGm-22D1 unknown mRNA	NA	coding protein	psRNATarget
XM_006601145.2	ncRNA:24   CAUUAAGUACAUCGGCUAGAGUGG   1   ||=||*|||||||||||*|||||| targets:1407   GUGAUCCAUGUAGCCGACCUCACC   1430 Target Full Sequence	2.5	PREDICTED: Glycine max WD repeat-containing protein 82-B-like (LOC100807825), transcript variant X1, mRNA	WD repeat-containing protein 82-B-like(LOC100807825)	coding protein	psRNATarget
XM_006601147.2	ncRNA:24   CAUUAAGUACAUCGGCUAGAGUGG   1   ||=||*|||||||||||*|||||| targets:1490   GUGAUCCAUGUAGCCGACCUCACC   1513 Target Full Sequence	2.5	PREDICTED: Glycine max WD repeat-containing protein 82-B-like (LOC100807825), transcript variant X6, mRNA	WD repeat-containing protein 82-B-like(LOC100807825)	coding protein	psRNATarget
XM_006601146.2	ncRNA:24   CAUUAAGUACAUCGGCUAGAGUGG   1   ||=||*|||||||||||*|||||| targets:1496   GUGAUCCAUGUAGCCGACCUCACC   1519 Target Full Sequence	2.5	PREDICTED: Glycine max WD repeat-containing protein 82-B-like (LOC100807825), transcript variant X2, mRNA	WD repeat-containing protein 82-B-like(LOC100807825)	coding protein	psRNATarget
XM_006601148.2	ncRNA:24   CAUUAAGUACAUCGGCUAGAGUGG   1   ||=||*|||||||||||*|||||| targets:1543   GUGAUCCAUGUAGCCGACCUCACC   1566 Target Full Sequence	2.5	PREDICTED: Glycine max WD repeat-containing protein 82-B-like (LOC100807825), transcript variant X7, mRNA	WD repeat-containing protein 82-B-like(LOC100807825)	coding protein	psRNATarget
XM_003550195.3	ncRNA:24   CAUUAAGUACAUCGGCUAGAGUGG   1   ||=||*|||||||||||*|||||| targets:1549   GUGAUCCAUGUAGCCGACCUCACC   1572 Target Full Sequence	2.5	PREDICTED: Glycine max WD repeat-containing protein 82-B-like (LOC100807825), transcript variant X5, mRNA	WD repeat-containing protein 82-B-like(LOC100807825)	coding protein	psRNATarget
XM_006588409.2	ncRNA:22   UUAAGUACAUCGGCUAGAGUGG   1   =||*|||||||||||*|||||| targets:1   GAUCCAUGUAGCCGACCUCACC   22 Target Full Sequence	2.5	PREDICTED: Glycine max sorting nexin-1-like (LOC100804649), transcript variant X3, mRNA	sorting nexin-1-like(LOC100804649)	coding protein	psRNATarget