ncRNA ID | novel_gma_miR4880 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr9:37344993-37345061 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR2968974;SRR2968978;SRR835758;SRR835759;SRR835761;SRR835763;SRR835766;SRR835767;SRR835768;SRR835771;SRR835772;SRR835773 |
Length | 23 |
Mature sequence(if miRNA) | 1 - UUUGAAUUUUUAAGACUGGUAAU - 23 |
Stem-loop(if miRNA) |
-          U   ACUG      A      UG  UUUGAAUUUU AAG    GUAAUC AUUACA  U  |||||||||| |||    |||||| ||||||  U  AAAUUUAAAG UUC    CAUUAG UAAUGU  C U          U   -ACA      C      CU |
Stem-loop sequence | UUUGAAUUUUUAAGACUGGUAAUCAAUUACAUGUUCUCUGUAAUCGAUUACACACUUUGAAAUUUAAAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003548548.3 |
|
2.0 | PREDICTED: Glycine max receptor-like protein kinase 5 (LOC100820277), mRNA | receptor-like protein kinase 5(LOC100820277) | coding protein | psRNATarget |