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BaseInfo

ncRNA ID	novel_gma_miR4878
Species	Glycine max
Class	miRNA
Genome position	Chr8:719127-719235 [+]
Reference genome	Glycine_max_v2.0
Source	SRR2968974;SRR835771;SRR1451605;SRR1451608;SRR1451623
Length	21
Mature sequence(if miRNA)	89 - UGGCAAGCUUCCUCGGCUAUU - 109
Stem-loop(if miRNA)	--     A    U A      U     UU   UU   U   A      UUAAUUAA   UAGCC AGGA G CUUGCC AGUUA  CCA  UUA GGG CUUUAU        U   ||||| |||| | |||||| |||||  |||  ||| ||| ||||||   AUCGG UCCU C GAACGG UUAAU  GGU  GAU CCC GAGGUA        U UU     C    U -      -     -U   UU   U   A      UACUCUGU
Stem-loop sequence	UAGCCAAGGAUGACUUGCCUAGUUAUUCCAUUUUAUGGGACUUUAUUUAAUUAAUUUGUCUCAUAUGGAGACCCUUAGUUUGGUUAAUUGGCAAGCUUCCUCGGCUAUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
NM_001249688.1	ncRNA:21   UUAUCGGCUCCUUCGAACGGU   1   |=|*|==|||||||||||||| targets:633   AGUUGUUGAGGAAGCUUGCCA   653 Target Full Sequence	3.0	Glycine max urease accessory protein UreF (LOC547960), mRNA	urease accessory protein UreF(LOC547960)	coding protein	psRNATarget
AY143592.1	ncRNA:21   UUAUCGGCUCCUUCGAACGGU   1   |=|*|==|||||||||||||| targets:633   AGUUGUUGAGGAAGCUUGCCA   653 Target Full Sequence	3.0	Glycine max urease accessory protein UreF mRNA, complete cds	NA	coding protein	psRNATarget
BT092135.1	ncRNA:21   UUAUCGGCUCCUUCGAACGGU   1   |=|*|==|||||||||||||| targets:727   AGUUGUUGAGGAAGCUUGCCA   747 Target Full Sequence	3.0	Soybean clone JCVI-FLGm-10M9 unknown mRNA	NA	coding protein	psRNATarget
XM_006595564.2	ncRNA:21   UUAUCGGCUCCUUCGAACGGU   1   |=|*|==|||||||||||||| targets:862   AGUUGUUGAGGAAGCUUGCCA   882 Target Full Sequence	3.0	PREDICTED: Glycine max urease accessory protein UreF (LOC547960), transcript variant X1, mRNA	urease accessory protein UreF(LOC547960)	coding protein	psRNATarget