ncRNA ID | novel_gma_miR4869 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr8:47682583-47682663 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR2968974;SRR835758;SRR835759;SRR835762 |
Length | 21 |
Mature sequence(if miRNA) | 1 - ACCCUCAAAGGCUUCCACUAC - 21 |
Stem-loop(if miRNA) |
--   C   A        A UA      -   ACGA     U   ACC UCA AGGCUUCC C  CUUCAU UUU    UCGAU C   ||| ||| |||||||| |  |||||| |||    ||||| A   UGG AGU UCCGAGGG G  GAAGUA AAA    AGCUA A AU   A   A        C UG      C   ---G     U |
Stem-loop sequence | ACCCUCAAAGGCUUCCACUACUUCAUUUUACGAUCGAUUCAAUAUCGAGAAACAUGAAGGUGCGGGAGCCUAUGAAGGUUA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003550815.3 |
|
1.0 | PREDICTED: Glycine max scarecrow-like protein 21 (LOC100813548), mRNA | scarecrow-like protein 21(LOC100813548) | coding protein | psRNATarget | |||||||||
XM_003525617.3 |
|
1.0 | PREDICTED: Glycine max scarecrow-like protein 21 (LOC100815959), mRNA | scarecrow-like protein 21(LOC100815959) | coding protein | psRNATarget | |||||||||
XM_006592868.2 |
|
2.0 | PREDICTED: Glycine max TPR repeat-containing thioredoxin TTL1-like (LOC100804531), mRNA | TPR repeat-containing thioredoxin TTL1-like(LOC100804531) | coding protein | psRNATarget |