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BaseInfo

ncRNA ID novel_gma_miR4869
Species Glycine max
Class miRNA
Genome position Chr8:47682583-47682663 [+]
Reference genome Glycine_max_v2.0
Source SRR2968974;SRR835758;SRR835759;SRR835762
Length 21
Mature sequence(if miRNA) 1 - ACCCUCAAAGGCUUCCACUAC - 21
Stem-loop(if miRNA) --   C   A        A UA      -   ACGA     U
  ACC UCA AGGCUUCC C  CUUCAU UUU    UCGAU C
  ||| ||| |||||||| |  |||||| |||    ||||| A
  UGG AGU UCCGAGGG G  GAAGUA AAA    AGCUA A
AU   A   A        C UG      C   ---G     U
Stem-loop sequence ACCCUCAAAGGCUUCCACUACUUCAUUUUACGAUCGAUUCAAUAUCGAGAAACAUGAAGGUGCGGGAGCCUAUGAAGGUUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003550815.3
ncRNA:21   CAUCACCUUCGGAAACUCCCA   1
  |||*|||||||||||||||||
targets:778   GUAUUGGAAGCCUUUGAGGGU   798

1.0 PREDICTED: Glycine max scarecrow-like protein 21 (LOC100813548), mRNA scarecrow-like protein 21(LOC100813548) coding protein psRNATarget
XM_003525617.3
ncRNA:21   CAUCACCUUCGGAAACUCCCA   1
  *||*|||||||||||||||||
targets:953   AUAUUGGAAGCCUUUGAGGGU   973

1.0 PREDICTED: Glycine max scarecrow-like protein 21 (LOC100815959), mRNA scarecrow-like protein 21(LOC100815959) coding protein psRNATarget
XM_006592868.2
ncRNA:21   CAUCACCUUCGGAAACUCCCA   1
  **|*||||||||||||||||*
targets:2999   ACACUGGAAGCCUUUGAGGGG   3019

2.0 PREDICTED: Glycine max TPR repeat-containing thioredoxin TTL1-like (LOC100804531), mRNA TPR repeat-containing thioredoxin TTL1-like(LOC100804531) coding protein psRNATarget