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BaseInfo

ncRNA ID novel_gma_miR4861
Species Glycine max
Class miRNA
Genome position Chr6:9850749-9850880 [-]
Reference genome Glycine_max_v2.0
Source SRR2968974
Length 24
Mature sequence(if miRNA) 1 - UUCGUGAAUGUAAACAAGAGGUGU - 24
Stem-loop(if miRNA) --         AAC      G      ---A       U    GACUAAUACACUAUUUGAGGUAAGU
  AUUUCUUGU   CAUUUA UGGAAU    UUCGAGU UGUA                         U
  |||||||||   |||||| ||||||    ||||||| ||||                         U
  UGGAGAACA   GUAAGU GCUUUG    AGAGUUU UUCA                         U
UG         AAU      -      GCUG       -    CAAAGUGAUAGAACUUUAACUAAUG
Stem-loop sequence AUUUCUUGUAACCAUUUAGUGGAAUAUUCGAGUUUGUAGACUAAUACACUAUUUGAGGUAAGUUUUGUAAUCAAUUUCAAGAUAGUGAAACACUUUUUGAGAGUCGGUUUCGUGAAUGUAAACAAGAGGUGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014778123.1
ncRNA:24   UGUGGAGAACAAAUGUAAGUGCUU   1
  ||-|=||||*||||||||=|||||
targets:2241   AC-CUUCUUAUUUACAUUUACGAA   2263

2.5 PREDICTED: Glycine max pentatricopeptide repeat-containing protein At2g33760-like (LOC100809199), mRNA pentatricopeptide repeat-containing protein At2g33760-like(LOC100809199) coding protein psRNATarget