ncRNA ID | novel_gma_miR4857 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr6:26594475-26594570 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR2968974 |
Length | 24 |
Mature sequence(if miRNA) | 73 - AGAACAAGCAUAGUUAGGUUCCUU - 96 |
Stem-loop(if miRNA) |
--   ACA   A  G          UAGUGGGCUUA         U   GGACA   AGA   AGC UA UUAGGUUCCU           AUAUGGAAG GAG     A   |||   ||| || ||||||||||           ||||||||| |||     G   UCU   UCG GU GAUCCAGGGA           UAUACCUUC CUC     A AA   -GA   A  A          -----------         -   AAGUU |
Stem-loop sequence | AGAACAAGCAUAGUUAGGUUCCUUAGUGGGCUUAAUAUGGAAGUGAGGGACAAGAUUGAACUCCUUCCAUAUAGGGACCUAGAUGAGCUAGUCUAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014779370.1 |
|
2.0 | PREDICTED: Glycine max probable polyamine oxidase 2 (LOC100799631), transcript variant X2, mRNA | probable polyamine oxidase 2(LOC100799631) | coding protein | psRNATarget | |||||||||
XM_003532021.3 |
|
2.0 | PREDICTED: Glycine max probable polyamine oxidase 2 (LOC100799631), transcript variant X1, mRNA | probable polyamine oxidase 2(LOC100799631) | coding protein | psRNATarget | |||||||||
AK287299.1 |
|
2.0 | Glycine max cDNA, clone: GMFL01-49-B21 | NA | coding protein | psRNATarget |