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BaseInfo

ncRNA ID novel_gma_miR4854
Species Glycine max
Class miRNA
Genome position Chr6:11732771-11732826 [+]
Reference genome Glycine_max_v2.0
Source SRR2968974
Length 24
Mature sequence(if miRNA) 33 - UAAAAGGCUUACGGAUCAAAUUGA - 56
Stem-loop(if miRNA) --ACCC                  A UU
      UGAUUUGUAAGUUUUUUA G  A
      |||||||||||||||||| |
      ACUAGGCAUUCGGAAAAU C  A
AGUUAA                  G CU
Stem-loop sequence ACCCUGAUUUGUAAGUUUUUUAAGUUAAUCCGUAAAAGGCUUACGGAUCAAAUUGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003524153.3
ncRNA:24   AGUUAAACUAGGCAUUCGGAAAAU   1
  ||||*|||||||||||*|||||||
targets:240   UCAAGUUGAUCCGUAAACCUUUUA   263

1.5 PREDICTED: Glycine max uncharacterized LOC100805437 (LOC100805437), mRNA uncharacterized LOC100805437(LOC100805437) coding protein psRNATarget