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BaseInfo

ncRNA ID novel_gma_miR4853
Species Glycine max
Class miRNA
Genome position Chr6:49564873-49564954 [-]
Reference genome Glycine_max_v2.0
Source SRR2968974;SRR835772
Length 21
Mature sequence(if miRNA) 62 - AGGUAUUGGCGCGCCUCAAUU - 82
Stem-loop(if miRNA) --             C       U   G -       AACA
  AGGUAUUGGCGCG CUCAAUU GAA U CAUGGUU    U
  ||||||||||||| ||||||| ||| | |||||||    G
  UCUAUAACUGCGC GAGUUAA UUU A GUACCGA    A
AC             C       U   G U       ACAA
Stem-loop sequence AGGUAUUGGCGCGCCUCAAUUUGAAGUCAUGGUUAACAUGAAACAAGCCAUGUAGUUUUAAUUGAGCCGCGUCAAUAUCUCA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
HI410514.1
ncRNA:21   UUAACUCCGCGCGGUUAUGGA   1
  |||||||||*|||||||||||
targets:73   AAUUGAGGCACGCCAAUACCU   93

1.5 Sequence 8639 from Patent EP2074227 NA coding protein psRNATarget
JB170975.1
ncRNA:21   UUAACUCCGCGCGGUUAUGGA   1
  |||||||||*|||||||||||
targets:73   AAUUGAGGCACGCCAAUACCU   93

1.5 Sequence 8639 from Patent EP2559767 NA coding protein psRNATarget
LQ242644.1
ncRNA:21   UUAACUCCGCGCGGUUAUGGA   1
  |||||||||*|||||||||||
targets:73   AAUUGAGGCACGCCAAUACCU   93

1.5 Sequence 8639 from Patent EP2985353 NA coding protein psRNATarget