Search result

BaseInfo

ncRNA ID	novel_gma_miR4852
Species	Glycine max
Class	miRNA
Genome position	Chr6:51043527-51043608 [-]
Reference genome	Glycine_max_v2.0
Source	SRR2968974;SRR835763;SRR835765;SRR835766;SRR835767;SRR835768;SRR835770;SRR835771;SRR835772;SRR835773
Length	21
Mature sequence(if miRNA)	1 - UUUGAAAGGCUGAUUUGAUAG - 21
Stem-loop(if miRNA)	--AG          C      AG          C      U     CAAAUUAGUC UUCAAA  UUUGAAGUGA AUCGAU A     |||||||||| ||||||  |||||||||| ||||||     GUUUAGUCGG AAGUUU  AAAUUUCACU UAGUUA A GAUA          A      CU          U      A
Stem-loop sequence	AGCAAAUUAGUCCUUCAAAAGUUUGAAGUGACAUCGAUUAAAAUUGAUUUCACUUUAAAUCUUUGAAAGGCUGAUUUGAUAG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_014771947.1	ncRNA:21   GAUAGUUUAGUCGGAAAGUUU   1   |*|*|||||||||||||||=| targets:1806   CCAGCAAAUCAGCCUUUCAGA   1826 Target Full Sequence	2.5	PREDICTED: Glycine max putative GTP diphosphokinase RSH1, chloroplastic (LOC100814134), transcript variant X2, mRNA	putative GTP diphosphokinase RSH1, chloroplastic(LOC100814134)	coding protein	psRNATarget
XM_003553611.3	ncRNA:21   GAUAGUUUAGUCGGAAAGUUU   1   |*|*|||||||||||||||=| targets:2095   CCAGCAAAUCAGCCUUUCAGA   2115 Target Full Sequence	2.5	PREDICTED: Glycine max putative GTP diphosphokinase RSH1, chloroplastic (LOC100814134), transcript variant X1, mRNA	putative GTP diphosphokinase RSH1, chloroplastic(LOC100814134)	coding protein	psRNATarget