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BaseInfo

ncRNA ID novel_gma_miR4848
Species Glycine max
Class miRNA
Genome position Chr5:15871118-15871170 [+]
Reference genome Glycine_max_v2.0
Source SRR2968974;SRR835761;SRR835765;SRR835767
Length 22
Mature sequence(if miRNA) 32 - UUUUGGAUGACGCCACUUCUAG - 53
Stem-loop(if miRNA) --        -A   C UG U  AUGU
  AGGAGUGG  UCA U  A AC    U
  ||||||||  ||| |  | ||
  UCUUCACC  AGU G  U UG    A
GA        GC   A GU U  AGAC
Stem-loop sequence AGGAGUGGAUCACUUGAUACAUGUUACAGAGUUUUGGAUGACGCCACUUCUAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006603844.2
ncRNA:22   GAUCUUCACCGCAGUAGGUUUU   1
  ||=|||||||||||||||=||*
targets:32   CUGGAAGUGGCGUCAUCCGAAU   53

2.5 PREDICTED: Glycine max UDP-glycosyltransferase 83A1-like (LOC100800437), transcript variant X2, mRNA UDP-glycosyltransferase 83A1-like(LOC100800437) coding protein psRNATarget
XM_003543992.3
ncRNA:22   GAUCUUCACCGCAGUAGGUUUU   1
  ||*|||||*||*||||||||||
targets:1493   CUUGAAGUUGCUUCAUCCAAAA   1514

2.5 PREDICTED: Glycine max sorting nexin 2B-like (LOC100792216), mRNA sorting nexin 2B-like(LOC100792216) coding protein psRNATarget
XM_003518373.3
ncRNA:22   GAUCUUCACCGCAGUAGGUUUU   1
  ||*|||||*||*||||||||||
targets:1476   CUUGAAGUUGCUUCAUCCAAAA   1497

2.5 PREDICTED: Glycine max sorting nexin 2B-like (LOC100784509), mRNA sorting nexin 2B-like(LOC100784509) coding protein psRNATarget