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BaseInfo

ncRNA ID novel_gma_miR4846
Species Glycine max
Class miRNA
Genome position Chr5:13910702-13910798 [+]
Reference genome Glycine_max_v2.0
Source SRR2968974
Length 24
Mature sequence(if miRNA) 74 - AUCUUAAGAAGGGGGUUGAAUUAA - 97
Stem-loop(if miRNA) --        U              A           U      A   G
  AAUUCAAC CCCCUUCUUAAGAU UCUGAGGCCAC UGUCUA CAA U
  |||||||| |||||||||||||| ||||||||||| |||||| |||
  UUAAGUUG GGGGAAGAAUUCUA AGACUCCGGUG ACAGAU GUU G
AA        -              A           U      C   G
Stem-loop sequence AAUUCAACUCCCCUUCUUAAGAUAUCUGAGGCCACUUGUCUAACAAGUGGUUGCUAGACAUGUGGCCUCAGAAAUCUUAAGAAGGGGGUUGAAUUAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003551995.3
ncRNA:24   AAUU------AAGUUGGGGGAAGAAUUCUA   1
  ||=|------||||||*|||||||||||=|
targets:187   UUGAAGGUUCUUCAACACCCUUCUUAAGGU   216

2.5 PREDICTED: Glycine max uncharacterized LOC100791587 (LOC100791587), transcript variant X4, mRNA uncharacterized LOC100791587(LOC100791587) coding protein psRNATarget
XM_006602347.2
ncRNA:24   AAUU------AAGUUGGGGGAAGAAUUCUA   1
  ||=|------||||||*|||||||||||=|
targets:187   UUGAAGGUUCUUCAACACCCUUCUUAAGGU   216

2.5 PREDICTED: Glycine max uncharacterized LOC100791587 (LOC100791587), transcript variant X3, mRNA uncharacterized LOC100791587(LOC100791587) coding protein psRNATarget