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BaseInfo

ncRNA ID	novel_gma_miR4828
Species	Glycine max
Class	miRNA
Genome position	Chr3:32975355-32975518 [+]
Reference genome	Glycine_max_v2.0
Source	SRR2968974
Length	24
Mature sequence(if miRNA)	141 - AUACAUAAUUCUGGAAUCAAGUAU - 164
Stem-loop(if miRNA)	--                     A  U     --  A                   A          A      --      AA   ACUUGAUUUUAGAAUUAUGUA AA AAAUU  AC UUUCAGAAAAGUAUUUUUG AAUUAUGUUA CAUAAU  UAUGAA  U   ||||||||||||||||||||| || |||||  || ||||||||||||||||||| |||||||||| ||||||  ||||||   UGAACUAAGGUCUUAAUACAU UU UUUAA  UG AAGGUCUUUUCAUAAAAGC UUAAUACAAU GUAUUA  GUAUUU  U UA                     A  U     AU  G                   C          C      AG      AC
Stem-loop sequence	ACUUGAUUUUAGAAUUAUGUAAAAUAAAUUACAUUUCAGAAAAGUAUUUUUGAAAUUAUGUUAACAUAAUUAUGAAAAUUCAUUUAUGGAAUUAUGCUAACAUAAUUCCGAAAAUACUUUUCUGGAAGGUUAAAUUUUUUAUACAUAAUUCUGGAAUCAAGUAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_006576693.2	ncRNA:24   UAUGAACUAAGGUCUUAAUACAUA   1   |||||||||||||||||||||||| targets:364   AUACUUGAUUCCAGAAUUAUGUAU   387 Target Full Sequence	0.0	PREDICTED: Glycine max protein PHYTOCHROME KINASE SUBSTRATE 4-like (LOC100775429), mRNA	protein PHYTOCHROME KINASE SUBSTRATE 4-like(LOC100775429)	coding protein	psRNATarget
XM_006583308.2	ncRNA:24   UAUGAACUAAGGUCUUAAUACAUA   1   ***=|||=||*||||||||||||* targets:660   CCCUUUGGUUGCAGAAUUAUGUAC   683 Target Full Sequence	3.0	PREDICTED: Glycine max glyoxylate/hydroxypyruvate reductase HPR3-like (LOC100812243), transcript variant X4, mRNA	glyoxylate/hydroxypyruvate reductase HPR3-like(LOC100812243)	coding protein	psRNATarget
XM_014777855.1	ncRNA:24   UAUGAACUAAGGUCUUAAUACAUA   1   ***=|||=||*||||||||||||* targets:709   CCCUUUGGUUGCAGAAUUAUGUAC   732 Target Full Sequence	3.0	PREDICTED: Glycine max glyoxylate/hydroxypyruvate reductase HPR3-like (LOC100812243), transcript variant X3, mRNA	glyoxylate/hydroxypyruvate reductase HPR3-like(LOC100812243)	coding protein	psRNATarget
XM_003529933.3	ncRNA:24   UAUGAACUAAGGUCUUAAUACAUA   1   ***=|||=||*||||||||||||* targets:994   CCCUUUGGUUGCAGAAUUAUGUAC   1017 Target Full Sequence	3.0	PREDICTED: Glycine max glyoxylate/hydroxypyruvate reductase HPR3-like (LOC100812243), transcript variant X2, mRNA	glyoxylate/hydroxypyruvate reductase HPR3-like(LOC100812243)	coding protein	psRNATarget
XM_014777854.1	ncRNA:24   UAUGAACUAAGGUCUUAAUACAUA   1   ***=|||=||*||||||||||||* targets:1004   CCCUUUGGUUGCAGAAUUAUGUAC   1027 Target Full Sequence	3.0	PREDICTED: Glycine max glyoxylate/hydroxypyruvate reductase HPR3-like (LOC100812243), transcript variant X1, mRNA	glyoxylate/hydroxypyruvate reductase HPR3-like(LOC100812243)	coding protein	psRNATarget