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BaseInfo

ncRNA ID novel_gma_miR4824
Species Glycine max
Class miRNA
Genome position Chr3:19680031-19680083 [-]
Reference genome Glycine_max_v2.0
Source SRR2968974;SRR2968978
Length 22
Mature sequence(if miRNA) 1 - UCUGGAUCAGCAGGUUUGAGAA - 22
Stem-loop(if miRNA) --  G      -             AA
  CU AGAUUU CUGAUUCAGAAAU  C
  || |||||| |||||||||||||
  GA UUUGGA GACUAGGUCUUUA  G
AA  G      C             CA
Stem-loop sequence CUGAGAUUUCUGAUUCAGAAAUAACGACAUUUCUGGAUCAGCAGGUUUGAGAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
FJ014727.1
ncRNA:22   AAGAGUUUGGACGACUAGGUCU   1
  ||**|=|=||||||||||||||
targets:743   UUACCGAGCCUGCUGAUCCAGA   764

3.0 Glycine max clone cw45 receptor-like kinase mRNA, complete cds NA coding protein psRNATarget
NM_001251757.1
ncRNA:22   AAGAGUUUGGACGACUAGGUCU   1
  ||**|=|=||||||||||||||
targets:743   UUACCGAGCCUGCUGAUCCAGA   764

3.0 Glycine max receptor-like kinase (LOC100526843), mRNA receptor-like kinase(LOC100526843) coding protein psRNATarget
NM_001250727.1
ncRNA:22   AAGAGUUUGGACGACUAGGUCU   1
  ||**|=|=||||||||||||||
targets:767   UUACCGAGCCUGCUGAUCCAGA   788

3.0 Glycine max FERONIA receptor-like kinase (LOC100499644), mRNA FERONIA receptor-like kinase(LOC100499644) coding protein psRNATarget
FJ014770.1
ncRNA:22   AAGAGUUUGGACGACUAGGUCU   1
  ||**|=|=||||||||||||||
targets:767   UUACCGAGCCUGCUGAUCCAGA   788

3.0 Glycine max clone cw88 FERONIA receptor-like kinase mRNA, complete cds NA coding protein psRNATarget