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BaseInfo

ncRNA ID novel_gma_miR4816
Species Glycine max
Class miRNA
Genome position Chr2:27709087-27709191 [+]
Reference genome Glycine_max_v2.0
Source SRR2968974
Length 24
Mature sequence(if miRNA) 1 - GAAGACGUCUUCCGCGAGACUCCA - 24
Stem-loop(if miRNA) --     C        C   A   C        U  AG      -GCGGC  A
  GAAGA GUCUUCCG GAG CUC AUGGAAGA GC  UCUUCC      AG C
  ||||| |||||||| ||| ||| |||||||| ||  ||||||      || A
  CUUUU CAGAAGGC CUC GAG UGCCUUUU CG  AGAAGG      UC A
GC     A        A   A   -        U  AA      AAGGAA  U
Stem-loop sequence GAAGACGUCUUCCGCGAGACUCCAUGGAAGAUGCAGUCUUCCGCGGCAGACAAUCUAAGGAAGGAAGAAAGCUUUUUCCGUGAGACUCACGGAAGACAUUUUCCG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003527348.3
ncRNA:24   ACCUCAGAGCGCCUUCUGCAGAAG   1
  *|||||||||||||||||||||||
targets:2279   AGGAGUCUCGCGGAAGACGUCUUC   2302

0.0 PREDICTED: Glycine max uncharacterized LOC100788685 (LOC100788685), mRNA uncharacterized LOC100788685(LOC100788685) coding protein psRNATarget