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BaseInfo

ncRNA ID novel_gma_miR4811
Species Glycine max
Class miRNA
Genome position Chr2:45850773-45850829 [-]
Reference genome Glycine_max_v2.0
Source SRR2968974
Length 24
Mature sequence(if miRNA) 1 - UGUAGGUUUGAUGUUGAAGAUGUU - 24
Stem-loop(if miRNA) --       UA    -  U         UU
  UAUUUUC  AACA CA AUUUACAUG  U
  |||||||  |||| || |||||||||
  GUAGAAG  UUGU GU UGGAUGUGU  C
UU       --    A  U         UU
Stem-loop sequence UAUUUUCUAAACACAUAUUUACAUGUUUCUUUGUGUAGGUUUGAUGUUGAAGAUGUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003521751.3
ncRNA:24   UUGUAGAAGUUGUAGUUUGGAUGU   1
  **=*||||||||*|||||||||||
targets:944   UUUCUCUUCAACUUCAAACCUACA   967

1.5 PREDICTED: Glycine max CMP-sialic acid transporter 1-like (LOC100776520), transcript variant X3, mRNA CMP-sialic acid transporter 1-like(LOC100776520) coding protein psRNATarget
XM_006577278.2
ncRNA:24   UUGUAGAAGUUGUAGUUUGGAUGU   1
  **=*||||||||*|||||||||||
targets:944   UUUCUCUUCAACUUCAAACCUACA   967

1.5 PREDICTED: Glycine max CMP-sialic acid transporter 1-like (LOC100776520), transcript variant X2, mRNA CMP-sialic acid transporter 1-like(LOC100776520) coding protein psRNATarget
XM_006577277.2
ncRNA:24   UUGUAGAAGUUGUAGUUUGGAUGU   1
  **=*||||||||*|||||||||||
targets:944   UUUCUCUUCAACUUCAAACCUACA   967

1.5 PREDICTED: Glycine max CMP-sialic acid transporter 1-like (LOC100776520), transcript variant X1, mRNA CMP-sialic acid transporter 1-like(LOC100776520) coding protein psRNATarget
XM_014772126.1
ncRNA:24   UUGUAGAAGUUGUAGUUUGGAUGU   1
  **=*||||||||*|||||||||||
targets:946   UUUCUCUUCAACUUCAAACCUACA   969

1.5 PREDICTED: Glycine max CMP-sialic acid transporter 1-like (LOC100787400), mRNA CMP-sialic acid transporter 1-like(LOC100787400) coding protein psRNATarget
XM_003546725.3
ncRNA:24   UUGUAGAAGUUGUAGUUUGGAUGU   1
  ||==*|*||||||*||||||||||
targets:1820   AAUGACCUCAACAACAAACCUACA   1843

2.5 PREDICTED: Glycine max ubiquitin carboxyl-terminal hydrolase 25-like (LOC100820436), transcript variant X1, mRNA ubiquitin carboxyl-terminal hydrolase 25-like(LOC100820436) coding protein psRNATarget
XM_006598110.2
ncRNA:24   UUGUAGAAGUUGUAGUUUGGAUGU   1
  ||==*|*||||||*||||||||||
targets:1825   AAUGACCUCAACAACAAACCUACA   1848

2.5 PREDICTED: Glycine max ubiquitin carboxyl-terminal hydrolase 25-like (LOC100820436), transcript variant X2, mRNA ubiquitin carboxyl-terminal hydrolase 25-like(LOC100820436) coding protein psRNATarget
XM_003531477.3
ncRNA:24   UUGUAGAAGUUGUAGUUUGGAUGU   1
  ||==*|*||||||*||||||||||
targets:1824   AAUGGCCUCAACAACAAACCUACA   1847

2.5 PREDICTED: Glycine max ubiquitin carboxyl-terminal hydrolase 25-like (LOC100775539), transcript variant X1, mRNA ubiquitin carboxyl-terminal hydrolase 25-like(LOC100775539) coding protein psRNATarget
XM_014779059.1
ncRNA:24   UUGUAGAAGUUGUAGUUUGGAUGU   1
  ||==*|*||||||*||||||||||
targets:1825   AAUGGCCUCAACAACAAACCUACA   1848

2.5 PREDICTED: Glycine max ubiquitin carboxyl-terminal hydrolase 25-like (LOC100775539), transcript variant X2, mRNA ubiquitin carboxyl-terminal hydrolase 25-like(LOC100775539) coding protein psRNATarget