ncRNA ID | novel_gma_miR4800 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr20:39360471-39360542 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR2968974 |
Length | 21 |
Mature sequence(if miRNA) | 52 - GGGCUUCUCUUUAUUGGCAGG - 72 |
Stem-loop(if miRNA) |
--    UU     UA         AAU    A   CCA   GGGC  CUCUU  UUGGCAGGA   UAUC UGA   C   ||||  |||||  |||||||||   |||| |||   CCCG  GAGAG  AACCGUUCU   AUAG ACU   U GU    UU     GA         ---    -   ACU |
Stem-loop sequence | GGGCUUCUCUUUAUUGGCAGGAAAUUAUCAUGACCACUUCAUCAGAUAUCUUGCCAAAGGAGAGUUGCCCUG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003537025.3 |
|
2.5 | PREDICTED: Glycine max putative pentatricopeptide repeat-containing protein At3g11460 (LOC100789146), mRNA | putative pentatricopeptide repeat-containing protein At3g11460(LOC100789146) | coding protein | psRNATarget |