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BaseInfo

ncRNA ID	novel_gma_miR4793
Species	Glycine max
Class	miRNA
Genome position	Chr19:7561682-7561871 [-]
Reference genome	Glycine_max_v2.0
Source	SRR2968974
Length	22
Mature sequence(if miRNA)	169 - AGAGGUUGCACUAGAAUGAUCA - 190
Stem-loop(if miRNA)	--A      G        U     -A      C       C      G                     C     A          -             GAGGUU CACUAGAA GAUCA  AUCAAU UGUGUUU UUCCUC UCUACCAGCUCAAUAUCUUUC UUUCA CUUUUGUUUU GUAAAUUACA    |||||| |||||||| |||||  |||||| ||||||| |||||| ||||||||||||||||||||| ||||| |||||||||| |||||||||G    CUCCAG GUGAUCUU UUAGU  UGGUUA GCACGGA AAGGAG AGAUGGUCGAGUUAUAGAAAG AAAGU GGAAACGAAA CAUUUGAUGU AAC      G        C     CG      A       C      G                     C     -          A
Stem-loop sequence	AGAGGUUGCACUAGAAUGAUCAAAUCAAUCUGUGUUUCUUCCUCGUCUACCAGCUCAAUAUCUUUCCUUUCAACUUUUGUUUUGUAAAUUACAGUGUAGUUUACAAAAGCAAAGGUGAAACGAAAGAUAUUGAGCUGGUAGAGGAGGAACAGGCACGAAUUGGUGCUGAUUCUUCUAGUGGGACCUCCAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_003537395.3	ncRNA:22   ACUAGUAAGAUCACGUUGGAGA   1   ***||*|||||||||||||||| targets:672   GCCUCCUUCUAGUGCAACCUCU   693 Target Full Sequence	1.0	PREDICTED: Glycine max condensin complex subunit 3-like (LOC100817677), mRNA	condensin complex subunit 3-like(LOC100817677)	coding protein	psRNATarget
XM_003552832.3	ncRNA:22   ACUAGUAAGAUCACGUUGGAGA   1   ***||*|||||||||||||||| targets:1381   GCCUCCUUCUAGUGCAACCUCU   1402 Target Full Sequence	1.0	PREDICTED: Glycine max condensin complex subunit 3-like (LOC100812144), mRNA	condensin complex subunit 3-like(LOC100812144)	coding protein	psRNATarget
XM_006586135.2	ncRNA:22   ACUAGUAAGAUCACGUUGGAGA   1   ||||==|||||||||||||||| targets:840   UGAUUGUUCUAGUGCAACCUCU   861 Target Full Sequence	2.0	PREDICTED: Glycine max SNF2 domain-containing protein CLASSY 3-like (LOC100806733), transcript variant X2, mRNA	SNF2 domain-containing protein CLASSY 3-like(LOC100806733)	coding protein	psRNATarget
XM_014779469.1	ncRNA:22   ACUAGUAAGAUCACGUUGGAGA   1   ||||==|||||||||||||||| targets:840   UGAUUGUUCUAGUGCAACCUCU   861 Target Full Sequence	2.0	PREDICTED: Glycine max SNF2 domain-containing protein CLASSY 3-like (LOC100806733), transcript variant X1, mRNA	SNF2 domain-containing protein CLASSY 3-like(LOC100806733)	coding protein	psRNATarget
XM_006591670.1	ncRNA:22   ACUAGUAAGAUCACGUUGGAGA   1   |*||==|||||||||||||||| targets:96   UAAUUGUUCUAGUGCAACCUCU   117 Target Full Sequence	2.0	PREDICTED: Glycine max glutathione gamma-glutamylcysteinyltransferase 3-like (LOC100778828), mRNA	glutathione gamma-glutamylcysteinyltransferase 3-like(LOC100778828)	coding protein	psRNATarget