ncRNA ID | novel_gma_miR4779 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr18:3987382-3987470 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR2968974 |
Length | 24 |
Mature sequence(if miRNA) | 66 - UAAAAUUUAUUGUUUGGAUGUUUU - 89 |
Stem-loop(if miRNA) |
--UG    UG     A        -   -      -AAU     AU     UAUU  GAUAG AAAUUUUA ACU UAGAAA    AAUUU  C     ||||  ||||| |||||||| ||| ||||||    |||||     GUAG  UUGUU UUUAAAAU UGA GUCUUU    UUAAG  A UUUU    GU     A        C   U      AGAU     AG |
Stem-loop sequence | UGUAUUUGGAUAGAAAAUUUUAACUUAGAAAAAUAAUUUAUCAGAGAAUUUAGAUUUCUGUAGUCUAAAAUUUAUUGUUUGGAUGUUUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
BT092460.1 |
|
2.0 | Soybean clone JCVI-FLGm-11A17 unknown mRNA | NA | coding protein | psRNATarget | |||||||||
XM_003526411.3 |
|
2.0 | PREDICTED: Glycine max probable xyloglucan glycosyltransferase 5 (LOC100776577), mRNA | probable xyloglucan glycosyltransferase 5(LOC100776577) | coding protein | psRNATarget |