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BaseInfo

ncRNA ID novel_gma_miR4779
Species Glycine max
Class miRNA
Genome position Chr18:3987382-3987470 [+]
Reference genome Glycine_max_v2.0
Source SRR2968974
Length 24
Mature sequence(if miRNA) 66 - UAAAAUUUAUUGUUUGGAUGUUUU - 89
Stem-loop(if miRNA) --UG    UG     A        -   -      -AAU     AU
    UAUU  GAUAG AAAUUUUA ACU UAGAAA    AAUUU  C
    ||||  ||||| |||||||| ||| ||||||    |||||
    GUAG  UUGUU UUUAAAAU UGA GUCUUU    UUAAG  A
UUUU    GU     A        C   U      AGAU     AG
Stem-loop sequence UGUAUUUGGAUAGAAAAUUUUAACUUAGAAAAAUAAUUUAUCAGAGAAUUUAGAUUUCUGUAGUCUAAAAUUUAUUGUUUGGAUGUUUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT092460.1
ncRNA:24   UUUUGUAGGUUUGUUAUUUAAAAU   1
  |=|=*|||*||||||||||||||*
targets:432   AGAGAAUCAAAACAAUAAAUUUUU   455

2.0 Soybean clone JCVI-FLGm-11A17 unknown mRNA NA coding protein psRNATarget
XM_003526411.3
ncRNA:24   UUUUGUAGGUUUGUUAUUUAAAAU   1
  |****||==|||||||||||||||
targets:2995   AUCUAAUUUAAACAAUAAAUUUUA   3018

2.0 PREDICTED: Glycine max probable xyloglucan glycosyltransferase 5 (LOC100776577), mRNA probable xyloglucan glycosyltransferase 5(LOC100776577) coding protein psRNATarget