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BaseInfo

ncRNA ID novel_gma_miR4772
Species Glycine max
Class miRNA
Genome position Chr18:57361224-57361305 [-]
Reference genome Glycine_max_v2.0
Source SRR2968974;SRR835759;SRR835761;SRR835762;SRR835765;SRR835767;SRR835771
Length 19
Mature sequence(if miRNA) 1 - GGAAGCUGCUGGGGGUGUC - 19
Stem-loop(if miRNA) --G       AA        AUA      U    A     U
   ACCCUCA  GGCUUCCA   CUUUAU UUUU UCGAU C
   |||||||  ||||||||   |||||| |||| ||||| A
   UGGGGGU  UCGAAGGU   GAAGUA AAAG AGCUA A
CUG       CG        GCG      C    -     U
Stem-loop sequence GACCCUCAAAGGCUUCCAAUACUUUAUUUUUUAUCGAUUCAAUAUCGAGAAACAUGAAGGCGUGGAAGCUGCUGGGGGUGUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003522750.3
ncRNA:19   CUGUGGGGGUCGUCGAAGG   1
  |||||||||||||||||**
targets:785   GACACCCCCAGCAGCUUGG   803

2.5 PREDICTED: Glycine max sugar transport protein 5-like (LOC100817162), mRNA sugar transport protein 5-like(LOC100817162) coding protein psRNATarget
XM_003522752.3
ncRNA:19   CUGUGGGGGUCGUCGAAGG   1
  |||||||||||||||||**
targets:781   GACACCCCCAGCAGCUUGG   799

2.5 PREDICTED: Glycine max sugar transport protein 5-like (LOC100818222), mRNA sugar transport protein 5-like(LOC100818222) coding protein psRNATarget
XM_006592444.2
ncRNA:19   CUGUGGGGGUCGUCGAAGG   1
  ||||||*|||||||||||*
targets:1469   GACACCACCAGCAGCUUCA   1487

2.5 PREDICTED: Glycine max formin-like protein 5 (LOC100793413), mRNA formin-like protein 5(LOC100793413) coding protein psRNATarget
XM_003533169.3
ncRNA:19   CUGUGGGGGUCGUCGAAGG   1
  ||||*|||||||*||||||
targets:2006   GACAGCCCCAGCCGCUUCC   2024

2.5 PREDICTED: Glycine max probable methyltransferase PMT16 (LOC100777356), mRNA probable methyltransferase PMT16(LOC100777356) coding protein psRNATarget