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BaseInfo

ncRNA ID novel_gma_miR4770
Species Glycine max
Class miRNA
Genome position Chr18:42465992-42466107 [+]
Reference genome Glycine_max_v2.0
Source SRR2968974
Length 24
Mature sequence(if miRNA) 1 - AAGUGUAUACAUGAUGAACGUUGA - 24
Stem-loop(if miRNA) --                           C        A      C         CUA
  AAGUGUAUACAUGAUGAACGUUGACAU GGUUUUCU GAAAAA CGAUGUUAA   A
  ||||||||||||||||||||||||||| |||||||| |||||| |||||||||
  UUCACAUAUGUACUACUUGUAACUGUA CCAAAAGA CUUUUU GUUACAAUU   U
UA                           A        C      A         AGA
Stem-loop sequence AAGUGUAUACAUGAUGAACGUUGACAUCGGUUUUCUAGAAAAACCGAUGUUAACUAAUAGAUUAACAUUGAUUUUUCCAGAAAACCAAUGUCAAUGUUCAUCAUGUAUACACUUAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003526723.3
ncRNA:24   AGUUGCAAGUAGUACAUAUGUGAA   1
  |==*=||*|||||||||||||=||
targets:2172   UUGCUGUACAUCAUGUAUACAUUU   2195

2.5 PREDICTED: Glycine max NAC domain-containing protein 14 (LOC100808469), mRNA NAC domain-containing protein 14(LOC100808469) coding protein psRNATarget
AK246041.1
ncRNA:24   AGUUGCAAGUAGUACAUAUGUGAA   1
  |==*=||*|||||||||||||=||
targets:2165   UUGCUGUACAUCAUGUAUACAUUU   2188

2.5 Glycine max cDNA, clone: GMFL01-49-I24 NA coding protein psRNATarget
BT093876.1
ncRNA:24   AGUUGCAAGUAGUACAUAUGUGAA   1
  |==*=||*|||||||||||||=||
targets:996   UUGCUGUACAUCAUGUAUACAUUU   1019

2.5 Soybean clone JCVI-FLGm-17L6 unknown mRNA NA coding protein psRNATarget