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BaseInfo

ncRNA ID novel_gma_miR4749
Species Glycine max
Class miRNA
Genome position Chr15:39945139-39945275 [-]
Reference genome Glycine_max_v2.0
Source SRR2045376
Length 23
Mature sequence(if miRNA) 1 - AUGUGUUCUGCGAGGGCUUUGCC - 23
Stem-loop(if miRNA) --                        A  A    C            C    G  GGCU     UUACA
  CAAAGCCCUUGCAGAACACGUAAU UU UACA GGAUUAAGAUAA GCAC UG    AAGAU     C
  |||||||||||||||||||||||| || |||| |||||||||||| |||| ||    |||||     A
  GUUUCGGGAGCGUCUUGUGUAUUA AA AUGU CCUAAUUUUAUU CGUG AC    UUCUA     U
CC                        C  C    A            A    G  --AU     UUACA
Stem-loop sequence CAAAGCCCUUGCAGAACACGUAAUAUUAUACACGGAUUAAGAUAACGCACGUGGGCUAAGAUUUACACAUACAUUAUCUUUACAGGUGCAUUAUUUUAAUCCAUGUACAACAUUAUGUGUUCUGCGAGGGCUUUGCC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003549465.3
ncRNA:23   CCGUUUCGGGAGCGUCUUGUGUA   1
  **|||||=|||||||||||||=|
targets:446   AACAAAGUCCUCGCAGAACACGU   468

2.5 PREDICTED: Glycine max transcription factor IBH1-like (LOC100814789), mRNA transcription factor IBH1-like(LOC100814789) coding protein psRNATarget