| ncRNA ID | novel_gma_miR4748 |
| Species | Glycine max |
| Class | miRNA |
| Genome position | Chr1:1887710-1887927 [-] |
| Reference genome | Glycine_max_v2.0 |
| Source | SRR2045376;SRR1292925;SRR1292929;SRR1451624 |
| Length | 22 |
| Mature sequence(if miRNA) | 1 - AUGGCCAUGGUUCUUGCAGCUG - 22 |
| Stem-loop(if miRNA) |
-- C ---- AUCACAUGUAUGUAUUGAUGAAAAAAGCAUAGUCAUGAUCAAAUGUUGGUGUCUGCUAUAAACAUGUUCUUCAAUCUGAU GCUGCAAGAACCAUGGUCA GAUC G A ||||||||||||||||||| |||| | CGACGUUCUUGGUACCGGU CUAG C U GU A UUUA AUACACGACUAUUUUUUUUACUAGUUUACAUACAUAACUACUUUUUCGUAUCAGUACUAGUUUGUAAACUACAUACUCGA |
| Stem-loop sequence | GCUGCAAGAACCAUGGUCACGAUCGAUCACAUGUAUGUAUUGAUGAAAAAAGCAUAGUCAUGAUCAAAUGUUGGUGUCUGCUAUAAACAUGUUCUUCAAUCUGAUAUAGCUCAUACAUCAAAUGUUUGAUCAUGACUAUGCUUUUUCAUCAAUACAUACAUUUGAUCAUUUUUUUUAUCAGCACAUACAUUUGAUCAUGGCCAUGGUUCUUGCAGCUG |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_003552196.3 |
|
2.5 | PREDICTED: Glycine max vacuolar cation/proton exchanger 3 (LOC100816231), mRNA | vacuolar cation/proton exchanger 3(LOC100816231) | coding protein | psRNATarget | |||||||||
| AK286779.1 |
|
2.5 | Glycine max cDNA, clone: GMFL01-36-I18 | NA | coding protein | psRNATarget |