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BaseInfo

ncRNA ID novel_gma_miR4745
Species Glycine max
Class miRNA
Genome position Chr11:31209627-31209709 [+]
Reference genome Glycine_max_v2.0
Source SRR2045375
Length 24
Mature sequence(if miRNA) 1 - AACCUCAGAUGUUGACUGUCACGU - 24
Stem-loop(if miRNA) ---AA -             -U  -    UAUCAAUGCCACAU
     C CUCAGAUGUUGAC  GU CACG              G
     | |||||||||||||  || ||||              U
     G GAGUCUGUAACUG  CA UGUA              G
CCUUG U             UG  C    ACUAUGCACUGUCA
Stem-loop sequence AACCUCAGAUGUUGACUGUCACGUAUCAAUGCCACAUGUGACUGUCACGUAUCAAUGUCACGUGUCAAUGUCUGAGUGGUUCC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006583894.2
ncRNA:24   UGCACUGUCAGUUGUAGACUCCAA   1
  |||||=||||||||=|||||||||
targets:2544   ACGUGGCAGUCAACGUCUGAGGUU   2567

2.5 PREDICTED: Glycine max probable WRKY transcription factor 3 (LOC100802109), mRNA probable WRKY transcription factor 3(LOC100802109) coding protein psRNATarget
XM_003516413.1
ncRNA:24   UGCACUGUCAGUUGUAGACUCCAA   1
  ||*||=||||||||=|||||||||
targets:430   ACAUGGCAGUCAACGUCUGAGGUU   453

2.5 PREDICTED: Glycine max dehydration-responsive element-binding protein 3-like (LOC100786075), mRNA dehydration-responsive element-binding protein 3-like(LOC100786075) coding protein psRNATarget