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BaseInfo

ncRNA ID novel_gma_miR4743
Species Glycine max
Class miRNA
Genome position Chr4:18233811-18233934 [-]
Reference genome Glycine_max_v2.0
Source SRR2045375;SRR2045376
Length 21
Mature sequence(if miRNA) 1 - UUUUUAAAAGUCUGGCCUGGC - 21
Stem-loop(if miRNA) --   A         G     CC G  -  U    UAC      --       --   CUGAGCC
  CAG CCAGACUUU AAAGG  U AG CC AGCC   GAUGAA  UCUUUGA  GGC       U
  ||| ||||||||| |||||  | || || ||||   ||||||  |||||||  |||
  GUC GGUCUGAAA UUUUU  A UC GG UCGG   UUAUUU  AGAAACU  CCG       G
CG   C         A     AU G  U  C    -CU      UC       AU   AUAUCCG
Stem-loop sequence CAGACCAGACUUUGAAAGGCCUGAGCCUAGCCUACGAUGAAUCUUUGAGGCCUGAGCCUGGCCUAUAGCCUAUCAAAGACUUUUAUUUCGGCUCGGUCUGAUAUUUUUAAAAGUCUGGCCUGGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003526283.3
ncRNA:21   CGGUCCGGUCUGAAAAUUUUU   1
  |=|||*|=|||||||||||||
targets:240   GUCAGACUAGACUUUUAAAAA   260

2.0 PREDICTED: Glycine max UPF0481 protein At3g47200-like (LOC100792539), mRNA UPF0481 protein At3g47200-like(LOC100792539) coding protein psRNATarget
XM_003550759.3
ncRNA:21   CGGUCCGGUCUGAAAAUUUUU   1
  **|=*||||||||||||||||
targets:770   UACGCGCCAGACUUUUAAAAA   790

2.0 PREDICTED: Glycine max NEDD8 ultimate buster 1-like (LOC100778435), mRNA NEDD8 ultimate buster 1-like(LOC100778435) coding protein psRNATarget