ncRNA ID | novel_gma_miR4743 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr4:18233811-18233934 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR2045375;SRR2045376 |
Length | 21 |
Mature sequence(if miRNA) | 1 - UUUUUAAAAGUCUGGCCUGGC - 21 |
Stem-loop(if miRNA) |
--   A         G     CC G  -  U    UAC      --       --   CUGAGCC   CAG CCAGACUUU AAAGG  U AG CC AGCC   GAUGAA  UCUUUGA  GGC       U   ||| ||||||||| |||||  | || || ||||   ||||||  |||||||  |||   GUC GGUCUGAAA UUUUU  A UC GG UCGG   UUAUUU  AGAAACU  CCG       G CG   C         A     AU G  U  C    -CU      UC       AU   AUAUCCG |
Stem-loop sequence | CAGACCAGACUUUGAAAGGCCUGAGCCUAGCCUACGAUGAAUCUUUGAGGCCUGAGCCUGGCCUAUAGCCUAUCAAAGACUUUUAUUUCGGCUCGGUCUGAUAUUUUUAAAAGUCUGGCCUGGC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003526283.3 |
|
2.0 | PREDICTED: Glycine max UPF0481 protein At3g47200-like (LOC100792539), mRNA | UPF0481 protein At3g47200-like(LOC100792539) | coding protein | psRNATarget | |||||||||
XM_003550759.3 |
|
2.0 | PREDICTED: Glycine max NEDD8 ultimate buster 1-like (LOC100778435), mRNA | NEDD8 ultimate buster 1-like(LOC100778435) | coding protein | psRNATarget |