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BaseInfo

ncRNA ID novel_gma_miR4741
Species Glycine max
Class miRNA
Genome position Chr15:48009990-48010056 [+]
Reference genome Glycine_max_v2.0
Source SRR2045374
Length 24
Mature sequence(if miRNA) 44 - ACACGGAAAUAGCUUGAAAAGAGA - 67
Stem-loop(if miRNA) --C             -C         C CU  A
   CUUUUCAAGCUGU  UUGUGUUGU C  UC A
   |||||||||||||  ||||||||| |  || A
   GAAAAGUUCGAUA  GGCACAACA G  AG A
AGA             AA         U -C  U
Stem-loop sequence CCUUUUCAAGCUGUCUUGUGUUGUCCCUUCAAAAUGACGUACAACACGGAAAUAGCUUGAAAAGAGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003535646.3
ncRNA:24   AGAGAAAAGUUCGAUAAAGGCACA   1
  *||=||||||*|||*|||||||||
targets:873   ACUUUUUUCACGCUCUUUCCGUGU   896

2.5 PREDICTED: Glycine max putative pentatricopeptide repeat-containing protein At3g08820 (LOC100807506), mRNA putative pentatricopeptide repeat-containing protein At3g08820(LOC100807506) coding protein psRNATarget