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BaseInfo

ncRNA ID novel_gma_miR4739
Species Glycine max
Class miRNA
Genome position Chr13:25459076-25459183 [+]
Reference genome Glycine_max_v2.0
Source SRR2045374
Length 22
Mature sequence(if miRNA) 87 - UAAAAAUAUGUUUGGUUUGACU - 108
Stem-loop(if miRNA) --A         G    G     UUUUU     C        UUUUCAUUUUCUAA
   CGGACUAAG GUGU UUUGG     AUUUU AUUUUUUG              A
   ||||||||| |||| |||||     ||||| ||||||||
   GUUUGGUUU UAUA AAAUC     UAAGA UAGAAAAC              A
UCA         G    A     ----U     U        UUUUAUUUUUAUCA
Stem-loop sequence ACGGACUAAGGGUGUGUUUGGUUUUUAUUUUCAUUUUUUGUUUUCAUUUUCUAAAAACUAUUUUUAUUUUCAAAAGAUUAGAAUUCUAAAAAUAUGUUUGGUUUGACU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003548547.2
ncRNA:22   UCAGUUUGGUUUGUAUAAAAAU   1
  =**|||||||||||||||*||=
targets:3201   GAACAAACCAAACAUAUUAUUG   3222

2.5 PREDICTED: Glycine max receptor-like protein kinase 5 (LOC100819744), mRNA receptor-like protein kinase 5(LOC100819744) coding protein psRNATarget
XM_003553436.3
ncRNA:22   UCAG-UUUGGUUUGUAUAAAAAU   1
  *||=-||||||||||||||||||
targets:1870   UGUUGAAACCAAACAUAUUUUUA   1892

3.0 PREDICTED: Glycine max cytochrome P450 94A1-like (LOC100795308), mRNA cytochrome P450 94A1-like(LOC100795308) coding protein psRNATarget