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BaseInfo

ncRNA ID novel_gma_miR4729
Species Glycine max
Class miRNA
Genome position Chr17:21205375-21205497 [+]
Reference genome Glycine_max_v2.0
Source SRR2045374;SRR2045375
Length 22
Mature sequence(if miRNA) 102 - CAGGUAGAGAGUUUGAGGUGCC - 123
Stem-loop(if miRNA) --A    -   UC         U   --UCG    ----CC   --         UCC        U
   GCCU AGA  CUUUACCUG ACU     ACCU      UCU  CAGGAAGGC   UGAUGCCU A
   |||| |||  ||||||||| |||     ||||      |||  |||||||||   ||||||||
   UGGA UUU  GAGAUGGAC UGA     UGGG      AGA  GUUUUUUCG   AUUACGGA G
CCG    G   GA         -   UGGAA    CACUUA   AU         -CC        G
Stem-loop sequence AGCCUAGAUCCUUUACCUGUACUUCGACCUCCUCUCAGGAAGGCUCCUGAUGCCUUAGGAGGCAUUACCGCUUUUUUGUAAGAAUUCACGGGUAAGGUAGUCAGGUAGAGAGUUUGAGGUGCC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT097802.1
ncRNA:22   CCGUGGAGUUUGAGAGAUGGAC   1
  |**|||||||||||||*||||*
targets:491   GUGACCUCAAACUCUCCACCUU   512

2.5 Soybean clone JCVI-FLGm-26K22 unknown mRNA NA coding protein psRNATarget