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BaseInfo

ncRNA ID novel_gma_miR4721
Species Glycine max
Class miRNA
Genome position Chr12:7766795-7766871 [+]
Reference genome Glycine_max_v2.0
Source SRR2045372;SRR1451609
Length 24
Mature sequence(if miRNA) 54 - UAAGACUUACGGAUCAAUUUGAUC - 77
Stem-loop(if miRNA) --                     ----------         A
  UCAAGUUGAUCCGUAAGUCUU          UUACGGAUC A
  |||||||||||||||||||||          ||||||||| G
  AGUUUAACUAGGCAUUCAGAA          AAUGCCUAG U
CU                     UUUUUAGUUG         U
Stem-loop sequence UCAAGUUGAUCCGUAAGUCUUUUACGGAUCAAGUUGAUCCGUAAGUUGAUUUUUAAGACUUACGGAUCAAUUUGAUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003547498.3
ncRNA:24   CUAGUUUAACUAGGCAUUCAGAAU   1
  ||||||*|||||||||||||||||
targets:461   GAUCAACUUGAUCCGUAAGUCUUA   484

1.0 PREDICTED: Glycine max CBL-interacting serine/threonine-protein kinase 1-like (LOC100780524), transcript variant X1, mRNA CBL-interacting serine/threonine-protein kinase 1-like(LOC100780524) coding protein psRNATarget
XM_014768353.1
ncRNA:24   CUAGUUUAACUAGGCAUUCAGAAU   1
  ||||||*|||||||||||||||||
targets:1056   GAUCAACUUGAUCCGUAAGUCUUA   1079

1.0 PREDICTED: Glycine max CBL-interacting serine/threonine-protein kinase 1-like (LOC100780524), transcript variant X2, mRNA CBL-interacting serine/threonine-protein kinase 1-like(LOC100780524) coding protein psRNATarget