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BaseInfo

ncRNA ID novel_gma_miR4702
Species Glycine max
Class miRNA
Genome position Chr20:997494-997646 [+]
Reference genome Glycine_max_v2.0
Source SRR2045372
Length 22
Mature sequence(if miRNA) 132 - UUUUGUCUUUGAAUGUCUUCCU - 153
Stem-loop(if miRNA) --         A   U      U              --    G           --AUCU AA    -   --C    U
  GAAGACAUU AAA ACAAAA GAAAUUUGGUGGGU  GAUA UUGAUCUUUAU      C  AAUU UGG   AUCU U
  ||||||||| ||| |||||| ||||||||||||||  |||| |||||||||||      |  |||| |||   ||||
  CUUCUGUAA UUU UGUUUU CUUUAAACCACCCA  CUGU AACUAGAAAUA      G  UUGA AUC   UAGA A
UC         G   C      C              UG    A           AUAAAU AC    U   UAA    A
Stem-loop sequence GAAGACAUUAAAAUACAAAAUGAAAUUUGGUGGGUGAUAGUUGAUCUUUAUAUCUCAAAAUUUGGCAUCUUUAAAGAUAAUCUAUAGUUCAGUAAAUAAUAAAGAUCAAAUGUCGUACCCACCAAAUUUCCUUUUGUCUUUGAAUGUCUUCCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014763884.1
ncRNA:22   UCCUUCUGUAAGUUUCUGUUUU   1
  =||||||||||||||*||||||
targets:1331   GGGAAGACAUUCAAAAACAAAA   1352

1.5 PREDICTED: Glycine max auxilin-like protein 1 (LOC100782939), transcript variant X2, mRNA auxilin-like protein 1(LOC100782939) coding protein psRNATarget
XM_003537552.3
ncRNA:22   UCCUUCUGUAAGUUUCUGUUUU   1
  =||||||||||||||*||||||
targets:1329   GGGAAGACAUUCAAAAACAAAA   1350

1.5 PREDICTED: Glycine max auxilin-like protein 1 (LOC100782939), transcript variant X1, mRNA auxilin-like protein 1(LOC100782939) coding protein psRNATarget