ncRNA ID | novel_gma_miR4702 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr20:997494-997646 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR2045372 |
Length | 22 |
Mature sequence(if miRNA) | 132 - UUUUGUCUUUGAAUGUCUUCCU - 153 |
Stem-loop(if miRNA) |
--         A   U      U              --    G           --AUCU AA    -   --C    U   GAAGACAUU AAA ACAAAA GAAAUUUGGUGGGU  GAUA UUGAUCUUUAU      C  AAUU UGG   AUCU U   ||||||||| ||| |||||| ||||||||||||||  |||| |||||||||||      |  |||| |||   ||||   CUUCUGUAA UUU UGUUUU CUUUAAACCACCCA  CUGU AACUAGAAAUA      G  UUGA AUC   UAGA A UC         G   C      C              UG    A           AUAAAU AC    U   UAA    A |
Stem-loop sequence | GAAGACAUUAAAAUACAAAAUGAAAUUUGGUGGGUGAUAGUUGAUCUUUAUAUCUCAAAAUUUGGCAUCUUUAAAGAUAAUCUAUAGUUCAGUAAAUAAUAAAGAUCAAAUGUCGUACCCACCAAAUUUCCUUUUGUCUUUGAAUGUCUUCCU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014763884.1 |
|
1.5 | PREDICTED: Glycine max auxilin-like protein 1 (LOC100782939), transcript variant X2, mRNA | auxilin-like protein 1(LOC100782939) | coding protein | psRNATarget | |||||||||
XM_003537552.3 |
|
1.5 | PREDICTED: Glycine max auxilin-like protein 1 (LOC100782939), transcript variant X1, mRNA | auxilin-like protein 1(LOC100782939) | coding protein | psRNATarget |