ncRNA ID | novel_gma_miR4701 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr19:32439709-32439854 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR2045372 |
Length | 23 |
Mature sequence(if miRNA) | 1 - AAAUACGGUGGUGAUGUGAGCAC - 23 |
Stem-loop(if miRNA) |
--          A      C  A                       A   -AG  A G         A    AC   GCUCACGUUA CACCGU UU GAAAGCUAGCUUUCUAAGAUGGU GUU   GU A CAUCGUCUU GAAA  U   |||||||||| |||||| || ||||||||||||||||||||||| |||   || | ||||||||| ||||   CGAGUGUAGU GUGGCA AA CUUUCGAUCGAAAGAUUCUACCA CGA   CA U GUGGCAGAA CUUU  A CA          G      U  A                       -   GAG  G G         G    CC |
Stem-loop sequence | GCUCACGUUAACACCGUCUUAGAAAGCUAGCUUUCUAAGAUGGUAGUUAGGUAAGCAUCGUCUUAGAAAACUACCUUUCGAAGACGGUGGUGACGAGAGCACCAUCUUAGAAAGCUAGCUUUCAAAUACGGUGGUGAUGUGAGCAC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003537732.3 |
|
2.5 | PREDICTED: Glycine max putative calcium-transporting ATPase 13, plasma membrane-type (LOC100787728), mRNA | putative calcium-transporting ATPase 13, plasma membrane-type(LOC100787728) | coding protein | psRNATarget |