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BaseInfo

ncRNA ID novel_gma_miR4701
Species Glycine max
Class miRNA
Genome position Chr19:32439709-32439854 [-]
Reference genome Glycine_max_v2.0
Source SRR2045372
Length 23
Mature sequence(if miRNA) 1 - AAAUACGGUGGUGAUGUGAGCAC - 23
Stem-loop(if miRNA) --          A      C  A                       A   -AG  A G         A    AC
  GCUCACGUUA CACCGU UU GAAAGCUAGCUUUCUAAGAUGGU GUU   GU A CAUCGUCUU GAAA  U
  |||||||||| |||||| || ||||||||||||||||||||||| |||   || | ||||||||| ||||
  CGAGUGUAGU GUGGCA AA CUUUCGAUCGAAAGAUUCUACCA CGA   CA U GUGGCAGAA CUUU  A
CA          G      U  A                       -   GAG  G G         G    CC
Stem-loop sequence GCUCACGUUAACACCGUCUUAGAAAGCUAGCUUUCUAAGAUGGUAGUUAGGUAAGCAUCGUCUUAGAAAACUACCUUUCGAAGACGGUGGUGACGAGAGCACCAUCUUAGAAAGCUAGCUUUCAAAUACGGUGGUGAUGUGAGCAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003537732.3
ncRNA:23   CACGAGUGUAGUGGUGGCAUAAA   1
  *||-|=|||||||||||||*|||
targets:144   UUG-UUACAUCACCACCGUUUUU   165

2.5 PREDICTED: Glycine max putative calcium-transporting ATPase 13, plasma membrane-type (LOC100787728), mRNA putative calcium-transporting ATPase 13, plasma membrane-type(LOC100787728) coding protein psRNATarget