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BaseInfo

ncRNA ID novel_gma_miR4696
Species Glycine max
Class miRNA
Genome position Chr14:14259593-14259731 [+]
Reference genome Glycine_max_v2.0
Source SRR2045372
Length 24
Mature sequence(if miRNA) 116 - CGGGGAAAGGAACAACAGAGAAGC - 139
Stem-loop(if miRNA) --      A             A   G       G      -A  -U     UG U   A     UU   U
  UUCUUU UUGUUCUUUUCCU GUU UUCCUGU UUGUCC  UG  AGUUG  U AAU UUUAA  UUG G
  |||||| ||||||||||||| ||| ||||||| ||||||  ||  |||||  | ||| |||||  ||| A
  AAGAGA AACAAGGAAAGGG CGA GGGGACA AACGGG  AC  UUAGU  G UUA AAAUU  AAC U
CG      C             G   A       G      GA  UU     GU -   -     UU   U
Stem-loop sequence UUCUUUAUUGUUCUUUUCCUAGUUGUUCCUGUGUUGUCCAUGUAGUUGUGUUAAUAUUUAAUUUUGUGAUUCAAUUUUAAAAUUGUGUGAUUUUCAAGGGGCAAGACAGGGGAAGCGGGGAAAGGAACAACAGAGAAGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006600977.2
ncRNA:24   CGAAGAGACAACAAGGAAAGGGGC   1
  *=**||*|||||||||||||||=|
targets:530   CUAGCUGUGUUGUUCCUUUCCCUG   553

2.5 PREDICTED: Glycine max protein NRT1/ PTR FAMILY 1.2-like (LOC100783985), mRNA protein NRT1/ PTR FAMILY 1.2-like(LOC100783985) coding protein psRNATarget