ncRNA ID | novel_gma_miR4690 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr10:48068405-48068489 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR2045371;SRR1292929;SRR1294474 |
Length | 24 |
Mature sequence(if miRNA) | 62 - AGUGAGACAAGGGUAGAAAGUGCU - 85 |
Stem-loop(if miRNA) |
--  U     AAG  U        -   A CU    A     AC   AG GAGAC   GG AGAAAGUG CUG C  GUCA GCAUG  C   || |||||   || |||||||| ||| |  |||| |||||   UC CUUUG   CC UCUUUCAC GAU G  UAGU CGUGC  A UA  C     -CA  U        A   C UU    -     AG |
Stem-loop sequence | AGUGAGACAAGGGUAGAAAGUGCUGACCUGUCAAGCAUGACCAGACGUGCUGAUUUGCUAGACACUUUCUUCCACGUUUCCCUAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003534283.3 |
|
2.5 | PREDICTED: Glycine max protein NUCLEAR FUSION DEFECTIVE 4-like (LOC100775393), mRNA | protein NUCLEAR FUSION DEFECTIVE 4-like(LOC100775393) | coding protein | psRNATarget | |||||||||
XM_003516451.3 |
|
2.5 | PREDICTED: Glycine max protein NUCLEAR FUSION DEFECTIVE 4-like (LOC100814771), mRNA | protein NUCLEAR FUSION DEFECTIVE 4-like(LOC100814771) | coding protein | psRNATarget |