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BaseInfo

ncRNA ID novel_gma_miR4685
Species Glycine max
Class miRNA
Genome position Chr5:12261995-12262065 [+]
Reference genome Glycine_max_v2.0
Source SRR1294487
Length 24
Mature sequence(if miRNA) 1 - AGCCGGGGUCUUGUUGAGUUGUUC - 24
Stem-loop(if miRNA) --   C   G    G   A         UG  UUUG
  AGC GGG UCUU UUG GUUGUUCAA  AC    A
  ||| ||| |||| ||| |||||||||  ||    A
  UCG CUC AGGA GGC UAAUAGGUU  UG    C
GG   -   A    -   A         GU  CGUU
Stem-loop sequence AGCCGGGGUCUUGUUGAGUUGUUCAAUGACUUUGAACUUGCGUUGUUGGAUAAUACGGAGGAACUCGCUGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014774142.1
ncRNA:24   CUUGUUGAGUUGUUCUGGGGCCGA   1
  ||||||||||||||||||||*|||
targets:544   GAACAACUCAACAAGACCCCAGCU   567

1.5 PREDICTED: Glycine max uncharacterized LOC106798172 (LOC106798172), mRNA uncharacterized LOC106798172(LOC106798172) coding protein psRNATarget
XM_014761661.1
ncRNA:24   CUUGUUGAGUUGUUCUGGGGCCGA   1
  |||||=||||||||*|||||||||
targets:1117   GAACAGCUCAACAAAACCCCGGCU   1140

2.5 PREDICTED: Glycine max uncharacterized LOC106794394 (LOC106794394), mRNA uncharacterized LOC106794394(LOC106794394) coding protein psRNATarget
XM_014766179.1
ncRNA:24   CUUGUUGAGUUGUUCUGGGGCCGA   1
  |||||=||||||||*|||||||||
targets:844   GAACAGCUCAACAAAACCCCGGCU   867

2.5 PREDICTED: Glycine max uncharacterized LOC106795598 (LOC106795598), mRNA uncharacterized LOC106795598(LOC106795598) coding protein psRNATarget
XM_014779146.1
ncRNA:24   CUUGUUGAGUUGUUCUGGGGCCGA   1
  |||||=||||||||*|||||||||
targets:802   GAACAGCUCAACAAAACCCCGGCU   825

2.5 PREDICTED: Glycine max uncharacterized LOC106799755 (LOC106799755), mRNA uncharacterized LOC106799755(LOC106799755) coding protein psRNATarget
XM_014764753.1
ncRNA:24   CUUGUUGAGUUGUUCUGGGGCCGA   1
  |||||=||||||||*|||||||||
targets:514   GAACAGCUCAACAAAACCCCGGCU   537

2.5 PREDICTED: Glycine max uncharacterized LOC106795329 (LOC106795329), partial mRNA uncharacterized LOC106795329(LOC106795329) coding protein psRNATarget
XM_014766199.1
ncRNA:24   CUUGUUGAGUUGUUCUGGGGCCGA   1
  |||||=||||||||*|||||||||
targets:511   GAACAGCUCAACAAAACCCCGGCU   534

2.5 PREDICTED: Glycine max uncharacterized LOC106795609 (LOC106795609), partial mRNA uncharacterized LOC106795609(LOC106795609) coding protein psRNATarget
XM_014763586.1
ncRNA:24   CUUGUUGAGUUGUUCUGGGGCCGA   1
  |||||=||||||||*|||||||||
targets:58   GAACAGCUCAACAAAACCCCGGCU   81

2.5 PREDICTED: Glycine max uncharacterized LOC106795051 (LOC106795051), partial mRNA uncharacterized LOC106795051(LOC106795051) coding protein psRNATarget
XM_014771585.1
ncRNA:24   CUUGUUGAGUUGUUCUGGGGCCGA   1
  |||||=||||||||*|||||||||
targets:58   GAACAGCUCAACAAAACCCCGGCU   81

2.5 PREDICTED: Glycine max uncharacterized LOC106797311 (LOC106797311), partial mRNA uncharacterized LOC106797311(LOC106797311) coding protein psRNATarget
XM_014770594.1
ncRNA:24   CUUGUUGAGUUGUUCUGGGGCCGA   1
  |||||=||||||||*|||||||||
targets:898   GAACAGCUCAACAAAACCCCGGCU   921

2.5 PREDICTED: Glycine max uncharacterized LOC106796949 (LOC106796949), partial mRNA uncharacterized LOC106796949(LOC106796949) coding protein psRNATarget
XM_014766819.1
ncRNA:24   CUUGUUGAGUUGUUCUGGGGCCGA   1
  |||||=||||||||*|||||||||
targets:58   GAACAGCUCAACAAAACCCCGGCU   81

2.5 PREDICTED: Glycine max uncharacterized LOC106795890 (LOC106795890), partial mRNA uncharacterized LOC106795890(LOC106795890) coding protein psRNATarget
XM_014776994.1
ncRNA:24   CUUGUUGAGUUGUUCUGGGGCCGA   1
  |||||=||||||||*|||||||||
targets:58   GAACAGCUCAACAAAACCCCGGCU   81

2.5 PREDICTED: Glycine max uncharacterized LOC106799045 (LOC106799045), partial mRNA uncharacterized LOC106799045(LOC106799045) coding protein psRNATarget
XM_014772458.1
ncRNA:24   CUUGUUGAGUUGUUCUGGGGCCGA   1
  |||||=||||||||*|||||||||
targets:514   GAACAGCUCAACAAAACCCCGGCU   537

2.5 PREDICTED: Glycine max uncharacterized LOC106797634 (LOC106797634), partial mRNA uncharacterized LOC106797634(LOC106797634) coding protein psRNATarget
XM_014778467.1
ncRNA:24   CUUGUUGAGUUGUUCUGGGGCCGA   1
  |||||=||||||||*|||||||||
targets:514   GAACAGCUCAACAAAACCCCGGCU   537

2.5 PREDICTED: Glycine max uncharacterized LOC106799574 (LOC106799574), partial mRNA uncharacterized LOC106799574(LOC106799574) coding protein psRNATarget
XM_014766738.1
ncRNA:24   CUUGUUGAGUUGUUCUGGGGCCGA   1
  |||||=||||||||*|||||||||
targets:511   GAACAGCUCAACAAAACCCCGGCU   534

2.5 PREDICTED: Glycine max uncharacterized LOC106795820 (LOC106795820), partial mRNA uncharacterized LOC106795820(LOC106795820) coding protein psRNATarget
XM_014762657.1
ncRNA:24   CUUGUUGAGUUGUUCUGGGGCCGA   1
  |||||=||||||||*|||||||||
targets:511   GAACAGCUCAACAAAACCCCGGCU   534

2.5 PREDICTED: Glycine max uncharacterized LOC106794772 (LOC106794772), partial mRNA uncharacterized LOC106794772(LOC106794772) coding protein psRNATarget
XM_014764738.1
ncRNA:24   CUUGUUGAGUUGUUCUGGGGCCGA   1
  |||||=||||||||*|||||||||
targets:58   GAACAGCUCAACAAAACCCCGGCU   81

2.5 PREDICTED: Glycine max uncharacterized LOC106795317 (LOC106795317), partial mRNA uncharacterized LOC106795317(LOC106795317) coding protein psRNATarget
XM_014762666.1
ncRNA:24   CUUGUUGAGUUGUUCUGGGGCCGA   1
  |||||=||||||||*|||||||||
targets:49   GAACAGCUCAACAAAACCCCGGCU   72

2.5 PREDICTED: Glycine max uncharacterized LOC106794781 (LOC106794781), partial mRNA uncharacterized LOC106794781(LOC106794781) coding protein psRNATarget
XM_014778465.1
ncRNA:24   CUUGUUGAGUUGUUCUGGGGCCGA   1
  |||||=||||||||*|||||||||
targets:67   GAACAGCUCAACAAAACCCCGGCU   90

2.5 PREDICTED: Glycine max uncharacterized LOC106799571 (LOC106799571), partial mRNA uncharacterized LOC106799571(LOC106799571) coding protein psRNATarget
XM_014772451.1
ncRNA:24   CUUGUUGAGUUGUUCUGGGGCCGA   1
  |||||=||||||||*|||||||||
targets:58   GAACAGCUCAACAAAACCCCGGCU   81

2.5 PREDICTED: Glycine max uncharacterized LOC106797626 (LOC106797626), partial mRNA uncharacterized LOC106797626(LOC106797626) coding protein psRNATarget
XM_014777502.1
ncRNA:24   CUUGUUGAGUUGUUCUGGGGCCGA   1
  |||||=||||||||*|||||||||
targets:58   GAACAGCUCAACAAAACCCCGGCU   81

2.5 PREDICTED: Glycine max uncharacterized LOC106799304 (LOC106799304), partial mRNA uncharacterized LOC106799304(LOC106799304) coding protein psRNATarget
XM_014774143.1
ncRNA:24   CUUGUUGAGUUGUUCUGGGGCCGA   1
  |||||=||||||||*|||||||||
targets:58   GAACAGCUCAACAAAACCCCGGCU   81

2.5 PREDICTED: Glycine max uncharacterized LOC106798173 (LOC106798173), partial mRNA uncharacterized LOC106798173(LOC106798173) coding protein psRNATarget
XM_014762705.1
ncRNA:24   CUUGUUGAGUUGUUCUGGGGCCGA   1
  |||||=||||||||*|||||||||
targets:58   GAACAGCUCAACAAAACCCCGGCU   81

2.5 PREDICTED: Glycine max uncharacterized LOC106794817 (LOC106794817), partial mRNA uncharacterized LOC106794817(LOC106794817) coding protein psRNATarget
XM_014778759.1
ncRNA:24   CUUGUUGAGUUGUUCUGGGGCCGA   1
  |||||=||||||||*|||||||||
targets:58   GAACAGCUCAACAAAACCCCGGCU   81

2.5 PREDICTED: Glycine max uncharacterized LOC106799709 (LOC106799709), partial mRNA uncharacterized LOC106799709(LOC106799709) coding protein psRNATarget
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