ncRNA ID | novel_gma_miR4681 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr7:12474811-12474972 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR2045371 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UUUUAGUCCCUGUAGUUUUGAAAG - 24 |
Stem-loop(if miRNA) |
--        CC        U       G                 A   -   AAUUCUUAC                  U   UUUUAGUC  UGUAGUUU GAAAGUG UCUUUUUAGUCCUUAUA UUU CAU         UUUUUAGUUCCUAUAGUU U   ||||||||  |||||||| ||||||| ||||||||||||||||| ||| |||         ||||||||||||||||||   AAAAUUAG  ACAUCAAA UUUUCAC AGAAAAAUCAGGGAUAU AAA GUA         GAGAAUCAGGGAUAUUAA C AG        AA        -       A                 G   U   AAAUUAAAA                  A |
Stem-loop sequence | UUUUAGUCCCUGUAGUUUUGAAAGUGGUCUUUUUAGUCCUUAUAAUUUCAUAAUUCUUACUUUUUAGUUCCUAUAGUUUUCAAAUUAUAGGGACUAAGAGAAAAUUAAAAUGUAAAGUAUAGGGACUAAAAAGAACACUUUUAAACUACAAAGAUUAAAAGA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003544171.3 |
|
2.5 | PREDICTED: Glycine max expansin-A6 (LOC100809018), mRNA | expansin-A6(LOC100809018) | coding protein | psRNATarget |