ncRNA ID | novel_gma_miR4676 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr4:29003298-29003393 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR2045371 |
Length | 19 |
Mature sequence(if miRNA) | 1 - UUGGGAUCGGGGUAAAUUC - 19 |
Stem-loop(if miRNA) |
--UUG        -          CA    --- --   UUCUGGGAGAUU      GGAUCGGG GUAAAUUCUA  GGUU   U  UCU            C      |||||||| ||||||||||  ||||   |  |||            C      CCUAGCUC CGUUUAGGGU  GGGG   U  UUG            U UCGGG        A          -U    UUG GU   UGGUUAGGUGUC |
Stem-loop sequence | UUGGGAUCGGGGUAAAUUCUACAGGUUUUCUUUCUGGGAGAUUCCUCUGUGGAUUGGUGUUUGUGUUGGGGUUGGGAUUUGCACUCGAUCCGGGCU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006579164.1 |
|
1.5 | PREDICTED: Glycine max uncharacterized LOC100801692 (LOC100801692), mRNA | uncharacterized LOC100801692(LOC100801692) | coding protein | psRNATarget | |||||||||
XM_006582545.1 |
|
2.5 | PREDICTED: Glycine max uncharacterized LOC102664171 (LOC102664171), mRNA | uncharacterized LOC102664171(LOC102664171) | coding protein | psRNATarget | |||||||||
XM_006579178.1 |
|
3.0 | PREDICTED: Glycine max uncharacterized LOC100786141 (LOC100786141), mRNA | uncharacterized LOC100786141(LOC100786141) | coding protein | psRNATarget |