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BaseInfo

ncRNA ID novel_gma_miR4676
Species Glycine max
Class miRNA
Genome position Chr4:29003298-29003393 [+]
Reference genome Glycine_max_v2.0
Source SRR2045371
Length 19
Mature sequence(if miRNA) 1 - UUGGGAUCGGGGUAAAUUC - 19
Stem-loop(if miRNA) --UUG        -          CA    --- --   UUCUGGGAGAUU
     GGAUCGGG GUAAAUUCUA  GGUU   U  UCU            C
     |||||||| ||||||||||  ||||   |  |||            C
     CCUAGCUC CGUUUAGGGU  GGGG   U  UUG            U
UCGGG        A          -U    UUG GU   UGGUUAGGUGUC
Stem-loop sequence UUGGGAUCGGGGUAAAUUCUACAGGUUUUCUUUCUGGGAGAUUCCUCUGUGGAUUGGUGUUUGUGUUGGGGUUGGGAUUUGCACUCGAUCCGGGCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006579164.1
ncRNA:19   CUUAAAUGGGGCUAGGGUU   1
  |||||||||||||||||=|
targets:592   GAAUUUACCCCGAUCCCGA   610

1.5 PREDICTED: Glycine max uncharacterized LOC100801692 (LOC100801692), mRNA uncharacterized LOC100801692(LOC100801692) coding protein psRNATarget
XM_006582545.1
ncRNA:19   CUUAAAUGGGGCUAGGGUU   1
  |||||*|||||||||||=|
targets:1497   GAAUUCACCCCGAUCCCGA   1515

2.5 PREDICTED: Glycine max uncharacterized LOC102664171 (LOC102664171), mRNA uncharacterized LOC102664171(LOC102664171) coding protein psRNATarget
XM_006579178.1
ncRNA:19   CUUAAA-UGGGGCUAGGGUU   1
  ||||||-|||||||||||||
targets:30   GAAUUUCACCCCGAUCCCAA   49

3.0 PREDICTED: Glycine max uncharacterized LOC100786141 (LOC100786141), mRNA uncharacterized LOC100786141(LOC100786141) coding protein psRNATarget