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BaseInfo

ncRNA ID novel_gma_miR4660
Species Glycine max
Class miRNA
Genome position Chr4:47754070-47754161 [-]
Reference genome Glycine_max_v2.0
Source SRR2045240;SRR1292927
Length 22
Mature sequence(if miRNA) 71 - AUUGAAUGAAGAAUCCCUUGGC - 92
Stem-loop(if miRNA) --                    G      C  AA  A        A
  AUUGAAUGAAGAAUCCCUUG CAAAUU CC  GG AAUUUGUC A
  |||||||||||||||||||| |||||| ||  || ||||||||
  UAACUUACUUCUUAGGGAAC GUUUAA GG  CU UUAAAUAG A
UU                    A      A  AA  A        G
Stem-loop sequence AUUGAAUGAAGAAUCCCUUGGCAAAUUCCCAAGGAAAUUUGUCAAAGGAUAAAUUAUCAAGGAAAUUUGACAAGGGAUUCUUCAUUCAAUUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003548213.3
ncRNA:22   CGGUUCCCUAAGAAGUAAGUUA   1
  |*|||||*=||||||||||||*
targets:687   GGCAAGGUGUUCUUCAUUCAAG   708

3.0 PREDICTED: Glycine max peroxidase 47-like (LOC100796105), mRNA peroxidase 47-like(LOC100796105) coding protein psRNATarget