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BaseInfo

ncRNA ID novel_gma_miR4654
Species Glycine max
Class miRNA
Genome position Chr18:37315161-37315267 [+]
Reference genome Glycine_max_v2.0
Source SRR2045239
Length 23
Mature sequence(if miRNA) 1 - UAGGACACCACUUCUCAACAACC - 23
Stem-loop(if miRNA) --U       C               C                UUUUUUA   UGA
   AGGACAC ACUUCUCAACAACCC AAAACACAUGUUUUCA       CUA   A
   ||||||| ||||||||||||||| ||||||||||||||||       |||   G
   UCCUGUG UGAAGAGUUGUUGGG UUUUGUGUACAAAAGU       GGU   C
GAU       U               -                -----UG   UCA
Stem-loop sequence UAGGACACCACUUCUCAACAACCCCAAAACACAUGUUUUCAUUUUUUACUAUGAAGCACUUGGGUUGAAAACAUGUGUUUUGGGUUGUUGAGAAGUUGUGUCCUUAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014771246.1
ncRNA:23   CCAACAACUCUUCACCACAGGAU   1
  |||||*|||||||||||||||||
targets:801   GGUUGCUGAGAAGUGGUGUCCUA   823

1.0 PREDICTED: Glycine max uncharacterized LOC102665297 (LOC102665297), transcript variant X2, mRNA uncharacterized LOC102665297(LOC102665297) coding protein psRNATarget