ncRNA ID | novel_gma_miR4652 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr5:39026577-39026823 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR2045239 |
Length | 24 |
Mature sequence(if miRNA) | 1 - CCAUGUCUCCUAUGUUGUAGUCCU - 24 |
Stem-loop(if miRNA) |
--CC    C    A                  C     A       C              C        G      CAA           UUCAUUUUCA       UCAUCGG         GUAG   G     AUGU UCCU UGUUGUAGUCCUAGGUCG ACUUA ACAUUUU UUUCUUCAAAGUCU AAAUUGUU AAGAUU   GCUUGUCGUCG          UCGUUGU       UCGUGCUUA    GAU A     |||| |||| |||||||||||||||||| ||||| ||||||| |||||||||||||| |||||||| ||||||   |||||||||||          |||||||       |||||||||    ||| A     UACA AGGA ACAACAUUAGGAUUCAGC UGGGU UGUAAAA AAAGGAGUUUUAGA UUUGACAG UUCUGA   CGAGCAGUAGC          AGCAGCA       AGCACGAGU    CUA G UAGA    A    C                  A     C       -              A        G      AUC           ----------       -------         AACA   A |
Stem-loop sequence | CCAUGUCUCCUAUGUUGUAGUCCUAGGUCGCACUUAAACAUUUUCUUUCUUCAAAGUCUCAAAUUGUUGAAGAUUCAAGCUUGUCGUCGUUCAUUUUCAUCGUUGUUCAUCGGUCGUGCUUAGUAGGAUGAAGAAUCACAAUGAGCACGAACGACGACGAUGACGAGCCUAAGUCUUGGACAGUUUAAGAUUUUGAGGAAAAAAAUGUCUGGGUACGACUUAGGAUUACAACACAGGAAACAUAGAU |