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BaseInfo

ncRNA ID	novel_gma_miR4646
Species	Glycine max
Class	miRNA
Genome position	Chr13:17620424-17620526 [+]
Reference genome	Glycine_max_v2.0
Source	SRR2045238;SRR1295522
Length	25
Mature sequence(if miRNA)	79 - AGGACGAAAAACAAAAGAACACAUU - 103
Stem-loop(if miRNA)	--           A      A         CA     G      CUCUGAA   UGUGUUUUUUU UUUUUC UCUUUAAAG  UUUUA AUAGCA       C   ||||||||||| |||||| |||||||||  ||||| ||||||       A   ACACAAGAAAA AAAAAG AGGAAUUUC  GAAAU UAUUGU       G UU           C      C         AC     A      AAAAAAU
Stem-loop sequence	UGUGUUUUUUUAUUUUUCAUCUUUAAAGCAUUUUAGAUAGCACUCUGAACAGUAAAAAAUGUUAUAUAAAGCACUUUAAGGACGAAAAACAAAAGAACACAUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_006586872.2	ncRNA:25   UUACACAAGAAAACAAAAAGCAGGA   1   *||---|||||||||||||||||=| targets:162   UAU---UUCUUUUGUUUUUCGUCUU   183 Target Full Sequence	1.5	PREDICTED: Glycine max sucrose nonfermenting 4-like protein (LOC100781819), transcript variant X4, mRNA	sucrose nonfermenting 4-like protein(LOC100781819)	coding protein	psRNATarget
XM_006586871.2	ncRNA:25   UUACACAAGAAAACAAAAAGCAGGA   1   *||---|||||||||||||||||=| targets:162   UAU---UUCUUUUGUUUUUCGUCUU   183 Target Full Sequence	1.5	PREDICTED: Glycine max sucrose nonfermenting 4-like protein (LOC100781819), transcript variant X3, mRNA	sucrose nonfermenting 4-like protein(LOC100781819)	coding protein	psRNATarget
XM_003533418.3	ncRNA:25   UUACACAAGAAAACAAAAAGCAGGA   1   *||---|||||||||||||||||=| targets:161   UAU---UUCUUUUGUUUUUCGUCUU   182 Target Full Sequence	1.5	PREDICTED: Glycine max sucrose nonfermenting 4-like protein (LOC100781819), transcript variant X6, mRNA	sucrose nonfermenting 4-like protein(LOC100781819)	coding protein	psRNATarget
XM_006586873.2	ncRNA:25   UUACACAAGAAAACAAAAAGCAGGA   1   *||---|||||||||||||||||=| targets:162   UAU---UUCUUUUGUUUUUCGUCUU   183 Target Full Sequence	1.5	PREDICTED: Glycine max sucrose nonfermenting 4-like protein (LOC100781819), transcript variant X5, mRNA	sucrose nonfermenting 4-like protein(LOC100781819)	coding protein	psRNATarget
XM_003536708.3	ncRNA:25   UUACACAAGAAAACAAAAAGCAGGA   1   *||*||*|||||*|||||||||||| targets:1162   CAUUUGGUCUUUAGUUUUUCGUCCU   1186 Target Full Sequence	2.5	PREDICTED: Glycine max nuclear speckle splicing regulatory protein 1 (LOC100809279), mRNA	nuclear speckle splicing regulatory protein 1(LOC100809279)	coding protein	psRNATarget
BT093368.1	ncRNA:25   UUACACAAGAAAACAAAAAGCAGGA   1   *||*||*|||||*|||||||||||| targets:1184   CAUUUGGUCUUUAGUUUUUCGUCCU   1208 Target Full Sequence	2.5	Soybean clone JCVI-FLGm-17O7 unknown mRNA	NA	coding protein	psRNATarget
NM_001252796.2	ncRNA:25   UUACACAAGAAAACAAAAAGCAGGA   1   *||*||*|||||*|||||||||||| targets:1182   CAUUUGGUCUUUAGUUUUUCGUCCU   1206 Target Full Sequence	2.5	Glycine max nuclear speckle splicing regulatory protein 1-like (LOC100776722), mRNA	nuclear speckle splicing regulatory protein 1-like(LOC100776722)	coding protein	psRNATarget
BT096670.1	ncRNA:25   UUACACAAGAAAACAAAAAGCAGGA   1   *||*||*|||||*|||||||||||| targets:779   CAUUUGGUCUUUAGUUUUUCGUCCU   803 Target Full Sequence	2.5	Soybean clone JCVI-FLGm-15N17 unknown mRNA	NA	coding protein	psRNATarget