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BaseInfo

ncRNA ID	novel_gma_miR4640
Species	Glycine max
Class	miRNA
Genome position	Chr7:44630013-44630184 [+]
Reference genome	Glycine_max_v2.0
Source	SRR2045238
Length	21
Mature sequence(if miRNA)	1 - GUUUGGGGUUUGGGGUUUGGG - 21
Stem-loop(if miRNA)	--G      G      G      G      G      G      G      G      G      G      G       UU AGG    UUUGGG UUUGGG UUUGGG UUUAGG UUUAGG UUUAGG UUUAGG UUUAGG UUUAGG UUUAGG UUUAGGG  U   G    |||||| |||||| |||||| |||||| |||||| |||||| |||||| |||||| |||||| |||||| |||||||  |    GGAUUU GGAUUU GGAUUU GGAUUU GGAUUU GGAUUU GGAUUU GGAUUU GGAUUU GGAUUU GGAUUUU  G   U UUG      G      G      G      G      G      G      G      G      G      G       GG AUU
Stem-loop sequence	GUUUGGGGUUUGGGGUUUGGGGUUUAGGGUUUAGGGUUUAGGGUUUAGGGUUUAGGGUUUAGGGUUUAGGGUUUAGGGUUUAGGGUUUAGGGUUUUAGGGUUUAGGGUUUAGGGUUUAGGGUUUAGGGUUUAGGGUUUAGGGUUUAGGGUUUAGGGUUUAGGGUUUAGGGUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_014767158.1	ncRNA:21   GGGUUUGGGGUUUGGGGUUUG   1   ***|||||||||||||||||| targets:51   AGAAAACCCCAAACCCCAAAC   71 Target Full Sequence	1.0	PREDICTED: Glycine max transcription factor UNE12-like (LOC100820324), mRNA	transcription factor UNE12-like(LOC100820324)	coding protein	psRNATarget
AK244962.1	ncRNA:21   GGGUUUGGGGUUUGGGGUUUG   1   **||||||||||||||=|||| targets:30   AACAAACCCCAAACCCUAAAC   50 Target Full Sequence	1.5	Glycine max cDNA, clone: GMFL01-17-O08	NA	coding protein	psRNATarget
XM_003553770.3	ncRNA:21   GGGUUUGGGGUUUGGGGUUUG   1   =|||*|||||||||||||||= targets:72   UCCACACCCCAAACCCCAAAU   92 Target Full Sequence	2.0	PREDICTED: Glycine max anthocyanidin reductase-like (LOC100819104), mRNA	anthocyanidin reductase-like(LOC100819104)	coding protein	psRNATarget
XM_014762142.1	ncRNA:21   GGGUUUGGGGUUUGGGGUUUG   1   *||||||=||||||=|||||| targets:1   GCCAAACUCCAAACUCCAAAC   21 Target Full Sequence	2.5	PREDICTED: Glycine max tripeptidyl-peptidase 2-like (LOC100783061), transcript variant X1, mRNA	tripeptidyl-peptidase 2-like(LOC100783061)	coding protein	psRNATarget
XM_014762143.1	ncRNA:21   GGGUUUGGGGUUUGGGGUUUG   1   *||||||=||||||=|||||| targets:1   GCCAAACUCCAAACUCCAAAC   21 Target Full Sequence	2.5	PREDICTED: Glycine max tripeptidyl-peptidase 2-like (LOC100783061), transcript variant X2, mRNA	tripeptidyl-peptidase 2-like(LOC100783061)	coding protein	psRNATarget
XM_014776585.1	ncRNA:21   GGGUUUGGGGUUUGGGGUUUG   1   ||||||||||||*|||||||* targets:325   CCCAAACCCCAACCCCCAAAA   345 Target Full Sequence	2.5	PREDICTED: Glycine max DNA annealing helicase and endonuclease ZRANB3 (LOC100788690), transcript variant X1, mRNA	DNA annealing helicase and endonuclease ZRANB3(LOC100788690)	coding protein	psRNATarget
XM_006581930.2	ncRNA:21   GGGUUUGGGGUUUGGGGUUUG   1   ||||||||||||*|||||||* targets:325   CCCAAACCCCAACCCCCAAAA   345 Target Full Sequence	2.5	PREDICTED: Glycine max DNA annealing helicase and endonuclease ZRANB3 (LOC100788690), transcript variant X2, mRNA	DNA annealing helicase and endonuclease ZRANB3(LOC100788690)	coding protein	psRNATarget
XM_014776586.1	ncRNA:21   GGGUUUGGGGUUUGGGGUUUG   1   ||||||||||||*|||||||* targets:327   CCCAAACCCCAACCCCCAAAA   347 Target Full Sequence	2.5	PREDICTED: Glycine max DNA annealing helicase and endonuclease ZRANB3 (LOC100788690), transcript variant X3, mRNA	DNA annealing helicase and endonuclease ZRANB3(LOC100788690)	coding protein	psRNATarget
XM_003548569.3	ncRNA:21   GGGUUUGGGGUUUGGGGUUUG   1   |||||||*||||||*|||||| targets:66   CCCAAACACCAAACACCAAAC   86 Target Full Sequence	2.5	PREDICTED: Glycine max gamma-tubulin complex component 2-like (LOC100795585), transcript variant X1, mRNA	gamma-tubulin complex component 2-like(LOC100795585)	coding protein	psRNATarget
XM_003555836.3	ncRNA:21   GGGUUU--GGGGUUUGGGGUUUG   1   **||||--||||||||||||||| targets:197   AACAAAACCCCCAAACCCCAAAC   219 Target Full Sequence	2.5	PREDICTED: Glycine max probable pectate lyase 12 (LOC100808438), mRNA	probable pectate lyase 12(LOC100808438)	coding protein	psRNATarget