ncRNA ID | novel_gma_miR4638 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr4:47103713-47103928 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1294487 |
Length | 22 |
Mature sequence(if miRNA) | 1 - UAAACUCAAAUCACCCUAUGGC - 22 |
Stem-loop(if miRNA) |
--      C        C        A      C              C            AA A         C   C      -------C  UAGUAUUCUGACAUGG   UAAACU AAAUCACC UAUGGCCG UGAAGU AAAGCCAAAGGCAA GUAACUUACUCC  C ACGACUAUG CAC GCCAUC        GC                G   |||||| |||||||| |||||||| |||||| |||||||||||||| ||||||||||||  | ||||||||| ||| ||||||        ||                A   AUUUGA UUUGGUGG AUACCGGC GCUUCA UUUUGGUUUCCGUU CGUUGAAUGAGG  G UGUUGAUGC GUG UGGUAG        CG                U GG      A        U        C      U              A            AA C         A   C      AACGUAAA  GUACCGAGACCGGGAA |
Stem-loop sequence | UAAACUCAAAUCACCCUAUGGCCGAUGAAGUCAAAGCCAAAGGCAACGUAACUUACUCCAACAACGACUAUGCCACCGCCAUCCGCUAGUAUUCUGACAUGGGAUAAGGGCCAGAGCCAUGGCAAAUGCAAGAUGGUCGUGACGUAGUUGUCGAAGGAGUAAGUUGCAUUGCCUUUGGUUUUUACUUCGCCGGCCAUAUGGUGGUUUAAGUUUAGG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003521876.3 |
|
2.5 | PREDICTED: Glycine max ethylene-responsive transcription factor ERF086-like (LOC100810022), mRNA | ethylene-responsive transcription factor ERF086-like(LOC100810022) | coding protein | psRNATarget |